MAG MJ-2014_bin-0345 from assembly ERS4649302

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Result Filters

Organism: uncultured Opitutia bacterium
cellular organisms; Bacteria; PVC group; Verrucomicrobiota; Opitutia; environmental samples

Attributes

collection date	2014-09-05
broad-scale environmental context	lentic water body
local-scale environmental context	lake
environmental medium	water
geographic location	Finland
investigation type	metagenome
isolation source	lake water
project name	microbes in stratified freshwaters
sample name	MJ-2014_bin-0345
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-06-15T17:03:32Z
ENA-LAST-UPDATE	2020-06-18T09:08:37Z
External Id	SAMEA6956669
INSDC center name	BILS
INSDC first public	2020-06-15T17:03:32Z
INSDC last update	2020-06-18T09:08:37Z
INSDC status	public
Submitter Id	MJ-2014_bin-0345
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	megahit
binning parameters	min_len:1500,min_bin_size:10000,maxP:93,minS:50
binning software	metabat
collection data	metagenome
completeness score	63.07
completeness software	checkm
contamination score	4.96
geographic location (latitude)	61.23083333333334
geographic location (longitude)	25.142222222222223
gtdb_taxonomy	d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Opitutaceae;g__Opitutus
metagenomic OTU	anoxic_mOTU_2828
metagenomic source	lake water metagenome
region	Evo
sample derived from	ERS4649302
sample owner	Leyden Fernandez
scientific_name	uncultured Opitutae bacterium
sequencing method	NovaSeq
site name	Mekkojärvi
taxonomic identity marker	gtdbtk followed by sourmash-lca, see publication
water environmental package	water