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Dickeya zeae strain MS1 isolate 6-4-1

Identifiers
BioSample: SAMN01991085; Sample name: MS1; SRA: SRS404340
Organism
Dickeya zeae MS1
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Dickeya; Dickeya zeae
Attributes
collection date2009-09
geographic locationChina: Guangzhou
hostBanana
isolation sourcepseudostem of banana affected by bacterial soft rot
broad-scale environmental contextTropical fruits
diseaseBacterial soft rot
disease stageVascular discoloration
sample typeCulture
strainMS1
alternate_ID6-4-1
Description

Dickeya zeae strain MS1 is the causal bacterium of banana bacterial soft rot. The disease was characterized by an odorous soft rot of the center of the rhizome. The rot progressed up the pseudostem, destroying the growing point and causing internal decay, and often accompanied by vascular discoloration. However it shows specific gray thallus in culturing compared with other Dickeya pathogens, and is short of the phytotoxin against a range of bacterial pathogens compared with other D. zeae strains. The purpose of this study is to sequence the whole genome to understand the epidemiology and comparative genomics of this pathogen with other Dickeya strains.

BioProject
PRJNA194072 Dickeya zeae MS1
Retrieve all samples from this project

Submission
Plant Protection Research Institute, Guangdong Academy of Agricultural Science, P. R. China, Jingxin Zhang; 2013-03-25
Accession:
SAMN01991085
ID:
1991085

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