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Uncultivated Lachnospira sp. UBA4320 genome recovered from SRX290707

Identifiers
BioSample: SAMN06453634; Sample name: Lachnospira sp. UBA4320; SRA: SRS2032848
Organism
Lachnospira sp. UBA4320
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; unclassified Lachnospira
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA4320
isolation sourcelow methane producing sheep
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX290707 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated71.73%
contamination_estimated2.01%
environmental_sampletrue
genome_coverage16.84
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873597.
Description

Uncultivated genome recovered from an assembly of the SRX290707 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453634
ID:
6453634

BioProject SRA Nucleotide

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