U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Alphaproteobacteria bacterium UBA6868 genome recovered from SRX834634

Identifiers
BioSample: SAMN06451680; Sample name: Alphaproteobacteria bacterium UBA6868; SRA: SRS2035152
Organism
Alphaproteobacteria bacterium UBA6868
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA6868
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834634 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated73.78%
contamination_estimated1.54%
environmental_sampletrue
genome_coverage9.5
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747033.
Description

Uncultivated genome recovered from an assembly of the SRX834634 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451680
ID:
6451680

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center