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Uncultivated Betaproteobacteria bacterium UBA5216 genome recovered from SRX866631

Identifiers
BioSample: SAMN06455352; Sample name: Betaproteobacteria bacterium UBA5216; SRA: SRS2035508
Organism
Betaproteobacteria bacterium UBA5216
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; unclassified Betaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationBrazil: Amazon River
isolateUBA5216
isolation sourcewater
metagenome sourceaquatic metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX866631 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.33%
contamination_estimated0.67%
environmental_sampletrue
genome_coverage24.93
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the aquatic metagenome reads: SRR1790678.
Description

Uncultivated genome recovered from an assembly of the SRX866631 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455352
ID:
6455352

BioProject SRA Nucleotide

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