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Uncultivated Burkholderiales bacterium UBA4200 genome recovered from SRX703649

Identifiers
BioSample: SAMN06455425; Sample name: Burkholderiales bacterium UBA4200; SRA: SRS2036123
Organism
Burkholderiales bacterium UBA4200
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; unclassified Burkholderiales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSpain: Alfacada pond, Ebro delta, Tarragona
isolateUBA4200
isolation sourceepidermal mucus of Anguilla anguilla fishes in Ebro delta
metagenome sourcefish metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX703649 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated79.70%
contamination_estimated1.66%
environmental_sampletrue
genome_coverage11.91
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fish metagenome reads: SRR1578068.
Description

Uncultivated genome recovered from an assembly of the SRX703649 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455425
ID:
6455425

BioProject SRA Nucleotide

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