Metagenome-assembled genome: SRR2037085_bin.21_CON... - BioSample

Metagenome-assembled genome: SRR2037085_bin.21_CONCOCT_v1.1_MAG

Organism: uncultured Mobiluncus sp.
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Actinomycetales; Actinomycetaceae; Mobiluncus; environmental samples

Attributes

collection date	2014-07-06
broad-scale environmental context	Host-associated
local-scale environmental context	Human
environmental medium	Digestive system
geographic location	China
investigation type	metagenome-assembled genome
isolation source	human gut metagenome
project name	Microbiome associated with periodontal health and disease
sample name	SRR2037085_bin.21_CONCOCT_v1.1_MAG
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2023-01-03
ENA-LAST-UPDATE	2023-01-03
External Id	SAMEA14085597
INSDC center alias	EBI
INSDC center name	European Bioinformatics Institute
INSDC first public	2023-01-03T00:33:34Z
INSDC last update	2023-01-03T00:33:34Z
INSDC status	public
Submitter Id	SRR2037085_bin.21_CONCOCT_v1.1_MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	SPAdes genome assembler v3.11.1
binning parameters	Default
binning software	CONCOCT v1.1
broker name	EMG broker account, EMBL-EBI
completeness score	65.86
completeness software	CheckM
contamination score	0.52
geographic location (latitude)	39.9
geographic location (longitude)	116.3
metagenomic source	human gut metagenome
sample derived from	SAMN03703356
scientific_name	uncultured Mobiluncus sp.
sequencing method	Illumina HiSeq 2000
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR2037085 of study SRP033553.

BioProject: PRJEB51075 Large-scale analysis of novel cellular microbes from the human gut biome
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