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Human gut genome

Identifiers
BioSample: SAMEA5850415; SRA: ERS3638943
Organism
uncultured Firmicutes bacterium
cellular organisms; Bacteria; Terrabacteria group; Bacillota; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationChina
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-00913
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:17Z
ENA-LAST-UPDATE2019-08-09T12:56:05Z
External IdSAMEA5850415
INSDC center nameEMG
INSDC first public2019-08-06T09:56:17Z
INSDC last update2019-08-09T12:56:05Z
INSDC statuspublic
Submitter IdMGYG-HGUT-00913
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Firmicutes bacterium
completeness score69.53
contamination score2.55
metagenomic sourcehuman gut metagenome
sample derived fromERS1343331
scientific_nameuncultured Firmicutes bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5850415
ID:
12519386

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