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Human gut genome

Identifiers
BioSample: SAMEA5850523; SRA: ERS3639050
Organism
uncultured Peptococcaceae bacterium
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Peptococcaceae; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationSweden
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-01020
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:19Z
ENA-LAST-UPDATE2019-08-09T12:56:06Z
External IdSAMEA5850523
INSDC center nameEMG
INSDC first public2019-08-06T09:56:19Z
INSDC last update2019-08-09T12:56:06Z
INSDC statuspublic
Submitter IdMGYG-HGUT-01020
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Peptococcaceae bacterium
completeness score64.82
contamination score2.34
metagenomic sourcehuman gut metagenome
sample derived fromERS235507
scientific_nameuncultured Peptococcaceae bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5850523
ID:
12519493

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