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Human gut genome

Identifiers
BioSample: SAMEA5850582; SRA: ERS3639109
Organism
uncultured Campylobacter sp.
cellular organisms; Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationSweden
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-01079
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:20Z
ENA-LAST-UPDATE2019-08-09T12:56:06Z
External IdSAMEA5850582
INSDC center nameEMG
INSDC first public2019-08-06T09:56:20Z
INSDC last update2019-08-09T12:56:06Z
INSDC statuspublic
Submitter IdMGYG-HGUT-01079
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Campylobacter sp.
completeness score63.52
contamination score2.33
metagenomic sourcehuman gut metagenome
sample derived fromERS473256
scientific_nameuncultured Campylobacter sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5850582
ID:
12519552

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