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Human gut genome

Identifiers
BioSample: SAMEA5851448; SRA: ERS3639974
Organism
uncultured Selenomonadaceae bacterium
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Negativicutes; Selenomonadales; Selenomonadaceae; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationDenmark
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-01944
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:33Z
ENA-LAST-UPDATE2019-08-09T12:56:11Z
External IdSAMEA5851448
INSDC center nameEMG
INSDC first public2019-08-06T09:56:33Z
INSDC last update2019-08-09T12:56:11Z
INSDC statuspublic
Submitter IdMGYG-HGUT-01944
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Selenomonadaceae bacterium
completeness score83.72
contamination score1.25
metagenomic sourcehuman gut metagenome
sample derived fromERS396354
scientific_nameuncultured Selenomonadaceae bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5851448
ID:
12520433

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