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Human gut genome

Identifiers
BioSample: SAMEA5851709; SRA: ERS3640235
Organism
uncultured Porphyromonas sp.
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationSpain
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-02205
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:37Z
ENA-LAST-UPDATE2019-08-09T12:56:13Z
External IdSAMEA5851709
INSDC center nameEMG
INSDC first public2019-08-06T09:56:37Z
INSDC last update2019-08-09T12:56:13Z
INSDC statuspublic
Submitter IdMGYG-HGUT-02205
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Porphyromonas sp.
completeness score99.29
contamination score0.47
metagenomic sourcehuman gut metagenome
sample derived fromERS199344
scientific_nameuncultured Porphyromonas sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5851709
ID:
12520707

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