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Human gut genome

Identifiers
BioSample: SAMEA5852082; SRA: ERS3640607
Organism
uncultured Haemophilus sp.
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationChina
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-02577
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:42Z
ENA-LAST-UPDATE2019-08-09T12:56:14Z
External IdSAMEA5852082
INSDC center nameEMG
INSDC first public2019-08-06T09:56:42Z
INSDC last update2019-08-09T12:56:14Z
INSDC statuspublic
Submitter IdMGYG-HGUT-02577
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Haemophilus sp.
completeness score81.82
contamination score4.42
metagenomic sourcehuman gut metagenome
sample derived fromSRS294989
scientific_nameuncultured Haemophilus sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5852082
ID:
12521079

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