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Human gut genome

Identifiers
BioSample: SAMEA5852347; SRA: ERS3640872
Organism
uncultured Atopobium sp.
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationSingapore
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-02842
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:46Z
ENA-LAST-UPDATE2019-08-09T12:56:17Z
External IdSAMEA5852347
INSDC center nameEMG
INSDC first public2019-08-06T09:56:46Z
INSDC last update2019-08-09T12:56:17Z
INSDC statuspublic
Submitter IdMGYG-HGUT-02842
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Atopobium sp.
completeness score51.72
contamination score0.00
metagenomic sourcehuman gut metagenome
sample derived fromSRS862521
scientific_nameuncultured Atopobium sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5852347
ID:
12521344

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