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Human gut genome

Identifiers
BioSample: SAMEA5852559; SRA: ERS3641084
Organism
uncultured Oscillospiraceae bacterium
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationNetherlands
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03054
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:49Z
ENA-LAST-UPDATE2019-08-09T12:56:19Z
External IdSAMEA5852559
INSDC center nameEMG
INSDC first public2019-08-06T09:56:49Z
INSDC last update2019-08-09T12:56:19Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03054
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Ruminococcaceae bacterium
completeness score87.56
contamination score0.34
metagenomic sourcehuman gut metagenome
sample derived fromSRS1876672
scientific_nameuncultured Ruminococcaceae bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5852559
ID:
12521556

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