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Human gut genome

Identifiers
BioSample: SAMEA5852879; SRA: ERS3641403
Organism
uncultured Atopobium sp.
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationUSA
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03373
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:55Z
ENA-LAST-UPDATE2019-08-09T12:56:21Z
External IdSAMEA5852879
INSDC center nameEMG
INSDC first public2019-08-06T09:56:55Z
INSDC last update2019-08-09T12:56:21Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03373
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Atopobium sp.
completeness score100
contamination score0.00
metagenomic sourcehuman gut metagenome
sample derived fromSRS344919
scientific_nameuncultured Atopobium sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5852879
ID:
12521875

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