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Human gut genome

Identifiers
BioSample: SAMEA5852907; SRA: ERS3641431
Organism
uncultured Staphylococcus sp.
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationUSA
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03401
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:55Z
ENA-LAST-UPDATE2019-08-09T12:56:22Z
External IdSAMEA5852907
INSDC center nameEMG
INSDC first public2019-08-06T09:56:55Z
INSDC last update2019-08-09T12:56:22Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03401
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Staphylococcus sp.
completeness score98.53
contamination score0.10
metagenomic sourcehuman gut metagenome
sample derived fromSRS403229
scientific_nameuncultured Staphylococcus sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5852907
ID:
12521903

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