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Human gut genome

Identifiers
BioSample: SAMEA5852978; SRA: ERS3641502
Organism
uncultured Alistipes sp.
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationnot provided
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-03472
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:56Z
ENA-LAST-UPDATE2019-08-09T12:56:22Z
External IdSAMEA5852978
INSDC center nameEMG
INSDC first public2019-08-06T09:56:56Z
INSDC last update2019-08-09T12:56:22Z
INSDC statuspublic
Submitter IdMGYG-HGUT-03472
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Alistipes sp.
completeness score94.47
contamination score1.78
metagenomic sourcehuman gut metagenome
sample derived fromSRS476047
scientific_nameuncultured Alistipes sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5852978
ID:
12521974

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