Human gut genome

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Result Filters

Organism: uncultured Treponema sp.
cellular organisms; Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; environmental samples

Attributes

broad-scale environmental context	human-associated habitat
local-scale environmental context	human gut
geographic location	not provided
investigation type	metagenome
isolation source	human gut
project name	Human gut genomes
sample name	MGYG-HGUT-03575
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2019-08-06T09:56:58Z
ENA-LAST-UPDATE	2019-08-09T12:56:23Z
External Id	SAMEA5853081
INSDC center name	EMG
INSDC first public	2019-08-06T09:56:58Z
INSDC last update	2019-08-09T12:56:23Z
INSDC status	public
Submitter Id	MGYG-HGUT-03575
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
broker name	EBI-EMG
common name	uncultured Treponema sp.
completeness score	94.3
contamination score	0.78
metagenomic source	human gut metagenome
sample derived from	SRS476289
scientific_name	uncultured Treponema sp.