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Human gut genome

Identifiers
BioSample: SAMEA5853702; SRA: ERS3642225
Organism
uncultured Lachnospiraceae bacterium
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationUnited Kingdom
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-04195
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:57:08Z
ENA-LAST-UPDATE2019-08-09T12:56:29Z
External IdSAMEA5853702
INSDC center nameEMG
INSDC first public2019-08-06T09:57:08Z
INSDC last update2019-08-09T12:56:29Z
INSDC statuspublic
Submitter IdMGYG-HGUT-04195
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Lachnospiraceae bacterium
completeness score77.17
contamination score3.13
metagenomic sourcehuman gut metagenome
sample derived fromERS746910
scientific_nameuncultured Lachnospiraceae bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5853702
ID:
12522732

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