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Human gut genome

Identifiers
BioSample: SAMEA5853756; SRA: ERS3642279
Organism
uncultured Acholeplasmataceae bacterium
cellular organisms; Bacteria; Terrabacteria group; Mycoplasmatota; Mollicutes; Acholeplasmatales; Acholeplasmataceae; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationUnited Kingdom
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-04249
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:57:08Z
ENA-LAST-UPDATE2019-08-09T12:56:29Z
External IdSAMEA5853756
INSDC center nameEMG
INSDC first public2019-08-06T09:57:08Z
INSDC last update2019-08-09T12:56:29Z
INSDC statuspublic
Submitter IdMGYG-HGUT-04249
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Acholeplasmataceae bacterium
completeness score94.38
contamination score4.65
metagenomic sourcehuman gut metagenome
sample derived fromERS746958
scientific_nameuncultured Acholeplasmataceae bacterium
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5853756
ID:
12522786

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