Pathogen: clinical or host-associated sample from ... - BioSample - NCBI

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Pathogen: clinical or host-associated sample from Citrobacter portucalensis

Identifiers: BioSample: SAMN11056453; Sample name: FDAARGOS_738; SRA: SRS4860280

Organism: Citrobacter portucalensis
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

geographic location	USA:VA
collected by	BEI Resources/American Type and Culture Collection (ATCC)
isolation source	inflamed biopsy tissue from sigmoid colon
collection date	Unknown
strain	FDAARGOS_738
latitude and longitude	Not applicable
isolate name alias	FDAARGOS_738
host sex	female
host disease	Crohn's Disease
host age	25Y
host	Homo sapiens
culture collection	FDA:FDAARGOS_738
isolate	Not applicable
host disease outcome	Unknown
host health state	Unknown
host description	Not applicable
host disease stage	Unknown
reference for biomaterial	HM-299D
host tissue sampled	inflamed biopsy tissue from sigmoid colon
identification method	Phenotypic and Molecular Methods
host_age_range	25Y
Collaborator ID	HM-299D

Description: strain 4_7_47CFAA

BioProject: PRJNA231221
Retrieve all samples from this project

Submission: FDA, Heike Sichtig; 2019-03-05

Accession:: SAMN11056453
ID:: 11056453

BioProject SRA Nucleotide

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Pathogen: clinical or host-associated sample from Citrobacter portucalensis
Pathogen: clinical or host-associated sample from Citrobacter portucalensis

biosample
GLA galactosidase alpha [Homo sapiens]
GLA galactosidase alpha [Homo sapiens]
Gene ID:2717

Gene
Gene Links for Nucleotide (Select 2217391603) (1)
Gene
Ralstonia sp. A13(2012) 16S ribosomal RNA gene, partial sequence
Ralstonia sp. A13(2012) 16S ribosomal RNA gene, partial sequence
gi|399515110|gb|JX094468.1|

Nucleotide
Burkholderia vietnamiensis isolate BVI2075, whole genome shotgun sequence
Burkholderia vietnamiensis isolate BVI2075, whole genome shotgun sequence
gi|2103027031|ref|NZ_CAJZAL01000019

Nucleotide

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