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Uncultivated Streptococcus suis UBA1166 genome recovered from SRX823173

Identifiers
BioSample: SAMN06452729; Sample name: Streptococcus suis UBA1166; SRA: SRS2034663
Organism
Streptococcus suis
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA1166
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823173 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.64%
contamination_estimated0.37%
environmental_sampletrue
genome_coverage15.08
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749790.
Description

Uncultivated genome recovered from an assembly of the SRX823173 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452729
ID:
6452729

BioProject SRA Nucleotide

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