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Uncultivated Streptococcus suis UBA1638 genome recovered from SRX822099

Identifiers
BioSample: SAMN06456995; Sample name: Streptococcus suis UBA1638; SRA: SRS2038511
Organism
Streptococcus suis
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA1638
isolation sourceplastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822099 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.71%
contamination_estimated0.75%
environmental_sampletrue
genome_coverage17.72
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748672.
Description

Uncultivated genome recovered from an assembly of the SRX822099 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456995
ID:
6456995

BioProject SRA Nucleotide

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