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BioSample

National Center for Biotechnology Information

Identifiers: BioSample: SAMN00001478; Sample name: BCM-HMP0057; SRA: SRS001943

Organism: Lactiplantibacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactiplantibacillus; Lactiplantibacillus plantarum; Lactiplantibacillus plantarum subsp. plantarum

Attributes

strain	ATCC 14917
estimated size	3214000
culture collection	ATCC:14917
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
sub species	plantarum
environmental medium	biological product [ENVO:02000043]
number of replicons	not determined
reference for biomaterial	not determined
geographic location	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
latitude and longitude	not determined
environmental package	missing
collection date	not determined
host	Homo sapiens
isolation and growth condition	not determined
source material identifiers	ATCC 14917, IAM 12477
project name	Lactobacillus plantarum ATCC 14917
isolation source	missing
misc_param: HMP supersite	gastrointestinal_tract
project_type	Reference Genome
nucleic acid extraction	not determined
finishing strategy (depth of coverage)	Level 3: Improved-High-Quality Draft46.14x;36
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method	454-GS-FLX
assembly	Newbler v. 1.1.03.24
misc_param: HMP body site	not determined
type-material	type strain of Lactobacillus plantarum