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BioSample

National Center for Biotechnology Information

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Rectal_1_P8

Identifiers: BioSample: SAMN33842157; Sample name: Rectal_1_P8; SRA: SRS18945793

Organism: Pseudomonas aeruginosa
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

strain	Rectal_1_P8
collected by	Gabriela Vasco
collection date	2022-03-03
geographic location	Ecuador: Quito
host	Homo sapiens
host disease	Colonization
isolation source	Rectal swab 1
latitude and longitude	0.28671686 S 78.55016137 W
genotype	ST-389
host age	90
host disease outcome	death
host health state	hospitalized
host sex	male
host subject id	P8
host tissue sampled	Rectal swab 1

BioProject: PRJNA946810 Pseudomonas aeruginosa
Retrieve all samples from this project

Submission: Universidad Central del Ecuador, Gabriela Vasco; 2023-03-21

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	resistant	==	7	mm	disk diffusion				CLSI
cefepime	susceptible	==	19	mm	disk diffusion				CLSI
ceftazidime	resistant	==	13	mm	disk diffusion				CLSI
ciprofloxacin	resistant	==	18	mm	disk diffusion				CLSI
gentamicin	resistant	==	6	mm	disk diffusion				CLSI
imipenem	resistant	==	13	mm	disk diffusion				CLSI
levofloxacin	resistant	==	14	mm	disk diffusion				CLSI
meropenem	resistant	==	15	mm	disk diffusion				CLSI
piperacillin-tazobactam	intermediate	==	20	mm	disk diffusion				CLSI

Accession:: SAMN33842157
ID:: 33842157

BioProject SRA Nucleotide

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Rectal_1_P8
Rectal_1_P8

biosample
txid287[orgn] AND "strain Rectal 1 P8"[All Fields] (1)
BioSample
Pathogen: clinical or host-associated sample from Pseudomonas aeruginosa
Pathogen: clinical or host-associated sample from Pseudomonas aeruginosa

biosample
txid287[orgn] AND "strain CEC64"[All Fields] (1)
BioSample
txid287[orgn] AND "isolate t5 d1 A11"[All Fields] (1)
SRA

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