Conserved Protein Domain Family
YpjD

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COG4137: YpjD 
ABC-type uncharacterized transport system, permease component [General function prediction only]
Statistics
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PSSM-Id: 443312
Aligned: 234 rows
Threshold Bit Score: 108.783
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013958042   1 MVi-----vLYALTALLYCGLAYHGWATrhpHVAtaagqaggatsavlvagggpippaggahgegR--PAW--WHVLMLA 71 
WP_011384760   1 MSsl----aLNIVALVALLPAALEALRAgd---------------------------------grS--GRFrlCMALAVT 41 
YP_426762     26 MSgs---lsLHIAAFLALLPAAFTPLRQtp---------------------------------grD--GLFwgTLGVAII 67 
WP_014415217   1 MIgf---laLHVVGLASLLPAALMPLRHpp---------------------------------rrD--GVFwlSLMLAAM 42 
WP_038561835   1 MQvp---ayLYEIILLLYAASIFSYFID---FIQkn---------------------------rkA--NVF--AFRLLTL 43 
WP_068443318   1 MNea---kwLYEIILTIYGLSLVGYFID---FIQqn---------------------------rkA--NRA--AFWLLSM 43 
WP_069960417   1 MSslptdraLLWLGALLYLAGFLTGLLA---LLRrs---------------------------saTapRAW--LNSLLVA 48 
WP_077718966   1 MGae---ryIYGVTIYLYALSVLFFFSD---FLHas---------------------------krR--NWI--AMSLLIG 43 
WP_096056855   1 MPalt-drtWLWFAAVFYFAGLVLGTIS---VLRqr---------------------------rhS--RAA--MYFLISV 45 
WP_102992027   1 MFqe---rwIIDFMVYVYAISLAFSFAD---LLRps---------------------------krL--EQL--SILFLSG 43 
WP_013958042  72 ALASHGLLLHETIFPAERM-M-FGFAFALSAMLWLGVGIYW-IES---FFFS-LAGLGLIVIP----VALVASLMPLAF- 139
WP_011384760  42 GPALWALSL-----MG------GQWQTSLSAALWVSIAATAaLFAalaQASAqGWRLAPLLMPflaaLGLLASLVQWVEa 110
YP_426762     68 GALVVSIVP--------SLrQ-GMWSTSFSSALWVSIAATLlLFSelcFRHQaAWRLTPVLMPyliaLGAMATIWEGAE- 137
WP_014415217  43 GAMAVALVP-------ATL-E-GGWNTSFSNALWASIATALcLYGvmcVVKPaAWRLVPILLPylmgLGLMANVWAGFE- 112
WP_038561835  44 VWFFQSLFLLQEMIAHAGL-PvKDVYEGLYFYAWVLVSLSL-FIN---RIYK-VDFLTFFLNV----VGFFMMLLYIASs 113
WP_068443318  44 VWFLQTVFLLQQVFVEKNF-PvLTLYDGLSFYAWVLVTLSL-ILN---KFFR-AQFVLFLINV----LAFFILLLAISNr 113
WP_069960417  49 GWISQMAGLYVRGAAAGGC-PlGNTFELVQFVAWSAMVVYF-FVG---TAFR-VSLLGLFTAG----YAATLAFVSLLI- 117
WP_077718966  44 VWALQSTFLFIRFMERDFV-PvLSMFDTLMFYAWVIVTFSI-IVN---ALFR-MPLFVFISNV----AGFGMVAASLFVt 113
WP_096056855  46 GFFIQTFGLYLRGLAVKGC-PiGNHFEIFQFTAWSATSLYL-VIG---ATFR-LSLLGYFTSC----LAATLTLLSLAI- 114
WP_102992027  44 VWVLQTIVLVVQ--RLALI-PiSASIDALSIYSWVLISFTL-VMH---FVYR-MSILFFIANS----LSFIMLAIHLFFv 111
WP_013958042 140 PGSQIL----GYAARPLFKLHFIIANVAYGLFTLAAFHAFLMLLAERRLHgfrhaparppeqqpSEWLGRWLDLLPPLLT 215
WP_011384760 111 PSQm-----sGAVPAAWLDLHIVVSVLTYALLTLAAVASLATFLQERALK--------------RKAPTQLTRMLPSVAD 171
YP_426762    138 GAPl-----aDHAPAFWTVLHIVIAVLTYGMLTLGAVAALAGFLQERALK--------------ARRPTSLTRRLPAAAE 198
WP_014415217 113 -TTRVLv--aSGTPPFWTMLHIAIALLTYGLLTNAAMAAVAGLIQERALK--------------AKRPTDLTRRLPAAAE 175
WP_038561835 114 AYEREWtq-tIPFMNEVLIAHITLAILAYGFFTLSFVFATMYLFQFQLLK--------------QKKGYRWWTRLGDLGK 178
WP_068443318 114 ATEHMQvd-gIELVHEMLIAHITLAIVSYGFFTVSLIFSLMYLVQYRLLK--------------QKKGFRWMRRIGDLEQ 178
WP_069960417 118 PQWDGArsmrIFGNNPWIELHAALAVFSYGVFGLLALTSIMQLLQNWSLK--------------HKRLNGLFWFLPSVVQ 183
WP_077718966 114 RDASAAi--sRQLVSELLFLHVSLALVAYAFFLFSFLLSLLYLTLNYMLK--------------KKRWNKLVLRAPSLSR 177
WP_096056855 115 PSFDAVrrvgTF-PNAWIEFHAALAIFSYGVFALLALTATMYLLQIYSLK--------------NHRLRGLFSFLPSILD 179
WP_102992027 112 RSS-SPvm-eKLLLSELVFLHVTLAMMANAFFSLASIGAGLYLVNNYLLK--------------QKKWNDLLRRLPSLDR 175
WP_013958042 216 LEKLLFRLIGAGFVLLTLTIGSGLLFSEELFGRAFRLDHKTVFALISWAMFGGILAGRIFRGWRGKVALRWVIASFGILL 295
WP_011384760 172 SEGLAGRLLLASEAVLGLGLATGMATQYFETGTVLALSHKILLSLLAFALIGALLIGHRVCGVRGRVAARVVLLSYLLLT 251
YP_426762    199 ADRLSWILLYTSEWVLGAGLLTGMAVEYLETGAILQPDHKSMLSSLAFLVIGGLILARSRWGVRGRVGARVVLLAYLLLT 278
WP_014415217 176 ADDLTTLLLFGSEGVLALGLISGMGLQYVESGTFLVLDHKTTLSLLAFLVIGGLLYARYRWGVRGRLAARLLMLAYLLLT 255
WP_038561835 179 LETYTFTSITIGTPLLLLSIVMGIVWAYTTTAVFYWYDWKTIGSLTVLAVYAVYLFLRLARGVRGKGLAIYTIAAFLILI 258
WP_068443318 179 LDSFSFKAVTAGVPLLTIAIALGVAWAYAANAEFYWFDLKTIGSILVLGVYVIYLLLRLGKGFQGRAISTYNSAAFLILL 258
WP_069960417 184 LDQINTRMLALGVLLLTISLGVGSVWFRQNMG--SVDQAKLVVTVGVWAAYLGVFLLRWRTWLVSVRFAWVCLVMFILAL 261
WP_077718966 178 IEPLIYGSSVIGVPLLLSSLILGIIWAHQQAVAGFWLDVKTWTSFLVFFVYAYYVFRRTVSNWSGKPLALSNAIAFSTVI 257
WP_096056855 180 LDHINLRLLKAGVFLMTASLAVGSVYWLRDTS--SVNAPKLIITLAIWLAYAVTFGLRILNRLLAKRLAWTCILLFAAAL 257
WP_102992027 176 LQGMSAWLLVLGTSLLLTAMTLGAIYAYQTIGAQFWEDAKVWSSLWVLALYAFILWKWARRQWHGRKLAWWTLLSLFAVL 255
WP_013958042 296 LAYVGSRFVIEvVLHRL 312
WP_011384760 252 LAYPGVKFVTQvLLP-- 266
YP_426762    279 LAFPGVKFVSDvLL--- 292
WP_014415217 256 LAFPGIKFITDfLL--- 269
WP_038561835 259 INFFLLSTYSS--FHFT 273
WP_068443318 259 INFFLFSNLSN--FHLH 273
WP_069960417 262 LSLGPVNSSRNhAIVLT 278
WP_077718966 258 LNTFISNFGIS--FHRW 272
WP_096056855 258 ISLPIVNSSRKpLTPEp 274
WP_102992027 256 SNYIITRSGFS--FHHW 270
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