3ZH9,1JQJ


Conserved Protein Domain Family
HolA

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COG1466: HolA 
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DNA polymerase III, delta subunit [Replication, recombination and repair]
Statistics
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PSSM-Id: 441075
Aligned: 933 rows
Threshold Bit Score: 79.912
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3ZH9_B        12 GEvhP-VYCLYGKETYLLQETVSRIRQTVVDq--EtKDFNLSVF--DleedPLDQAIADAETFPFMGERRLVIVKNP--- 83 
WP_013459537  13 NSa-PrAMALFGESHFLIDRYAHRLSQ-I-E-----GA-SVLSLyhDe--yDFNTAKAHLSQGSLFGDQNLLIVKHE--- 78 
WP_011980123  11 nqglPkAVLVFGENEYMMDHYVELYRTKLDA-----KE-SALNLyyDe--wNFEQAKNFLSQTSLFGGTNLVVVKHD--- 79 
NP_208039     13 Rl--PkAVFLYGEFDFFIHYYIQTISALFKCdnpD-I--ETSLFyaSd--yEKSQIATLLEQDSLFGGSSLVVLKLDfal 85 
WP_013553342  11 keglPnAVLLYGDNAYLIEETIERYRKELDA-----SE-TLLAMyhDe--yDFERARSYLSQSSLFGGTNFLLIRRD--- 79 
YP_002344059  13 DSi-PnFFFLYGADNFQSELYAEFIKEKYK------PD-ETLKLffEe--yNFTRASDFLSAGSLFSEKKLLEIKTS--- 79 
WP_014769101  13 GNt-PkSTFLYGACSYQNNALCEQLLSLLQA---N-ND-EKVMMyyDe--yHFSTAKNFLSQSSLFGDRNILIIKSD--- 81 
WP_013327404  13 KSi-SnSFVFFGESSFLIDMYTKMLTNI--E-----NT-NILSYyhDe--yDFNSAKAHLSQGSLFGDRNILIIKSE--- 78 
WP_085784375  14 PSl-PaVFYLYGSNQGLLSFREQTLLK-ILKe-tH-RSLKVDVL--Esf-----eDLNFLESPSLFGEPNDIKLYRF--- 79 
BBG65421      13 GKl-PkSVMLYGDNDYYIDEAVERIVEMTGA-----KE-SMLKLyyDe--yDFQRAKNYLGQSSLFGDLNLLLVKSD--- 80 
3ZH9_B        84 -Yf-lTgekkkekieHNVSALESYIQSpAPYTVFVLL--APy-----eKLDER-KKLT--KALKK---H--AFMMEAkEL 146
WP_013459537  79 -KklpK---------AELDTLVELVGK-NSDNTFIYCyyGD---------DVK--GAD--TAFKG---ShtG-SVRFfHP 130
WP_011980123  80 -KkipK---------KELDALVALANR-NSDNYFLYLydGT-------AKDAK--SMQ--SAFTD---KkgGVWVRLfEA 134
NP_208039     86 hKkfkE---------NDINLFLKALER-PSHNRLIIGlyNAksdttkyKYTSD--AIVk--FFQKsplKdeAICARFfIP 151
WP_013553342  80 -KkipK---------KELDTLIALTQK-NPDNYFLFDfrGE-------ARDAK--GMQ--SSFPE---KkgGIWVRFfEP 134
YP_002344059  80 -KkipT---------KDLKVLVELCKN-NTDNFFLLElyDE---------SSK--QSDieKIFS-------PHFVRFfKA 130
WP_014769101  82 -KtipA---------KELETLVELCAK-NDSSYFIYQyfGE---------DKKaTPLT--KCFDK---KtqAAFVRLfKA 136
WP_013327404  79 -KkvpK---------KELDILLELCDK-NPDNIFVYAyyGS---------DHK--TYNnkKAFAK---Tk-AMNVRFfHP 132
WP_085784375  80 -Dq-lTe--------KSLGTLQETVKTl--NTSLLLI--SQ-------SLNFK-SKVT--QFLET---QphcYALGCyLP 132
BBG65421      81 -RkipK---------KELSHLTELAAR-NENSYFLYAytGS---------DFK--TMT--SVFSP---KadAQHVRFfPP 133
3ZH9_B       147 N-AKETTDFTVNLAKTEQKTIGTEAAEHLVLLVNGHLSSIFQEIQKLCTFIGDREEITLDDVKMLVARSLEQNIFELINK 225
WP_013459537 131 F-AAEARAIVMQEAQAIGVQLDNQAAFHLLDIHNNDLALACNELSKLSIL---GKPIGMKEIDEHVFGLSEIKLDHFIAR 206
WP_011980123 135 N-IREGVAILQQKAQRIGLDIDHYALQHLMLLLNNNIALCSNELDKLAIL---RTPVTSKDIDRLVYSTAPLATEQLLID 210
NP_208039    152 K-TWESLKFLQERANFLHLDISGHLLNALFEINNEDLGVSFNDLDKLAVL---NAPITLEDIQELSSNAGDMDLQKLILG 227
WP_013553342 135 N-PREGVAILRRKAEALGLQIDDYALNHLLTLLENNLALAAKELEKLSIL---QCPVSTKEIDRLVYSSAPLAVEKLLVD 210
YP_002344059 131 NgAKEGVELLSIKAKQLGVEITQNALFTLFTSFDENLYLAASELNKFSGL-----RVDEKTIEQYCYSLNTGSFESFFDK 205
WP_014769101 137 E-FNEAMQLLQNHARLVGLNIDRYALQHLYMIHMEELSLCINECEKLLVL---NKEIHIKDIDALVYGLGNVSMEHFLTK 212
WP_013327404 133 K-EYEAQNIVFQLAQEKNVNIDKFTISHLLKIHNGDVALASNEIDKFRVY---DKAITTKDVDNLVYGLASINLDDFIKK 208
WP_085784375 133 A-QDEITQYARLFLTKHSITLDPSVFTVLIDLLKTNLEQFHQNLEKLSLYAHNTSTLTLEDIESLLISDLKPNFELLCQG 211
BBG65421     134 N-LNEAAALLQQKARQMGIEIDRYAVEHLLNALGLNLSMAMNELNKLALL---PGPIGTKEIDEHIFSLVPVAMETFLVS 209
3ZH9_B       226 IVNRKRTESLQIFYDLLK-QNEEPIKIMALISNQFRLILQTKYFAEQ-G-YGQKQIaSNLKv-HP-F--RVKLAMDQARL 298
WP_013459537 207 VIEKKEFL--PSLRHLLE-SGENEIQLLTAISGFLTQLYLFNTAIKIhGvADSAMV---LGyklPgF--VEKERAALSiK 278
WP_011980123 211 LFNKKPIT--ATITKLLD-LGENENDLLRSTQFFVNQIFLFHAYIKLhGhVDSAAI---LGyklPkQ--IEDQKAQLALR 282
NP_208039    228 LFLKKSAL--DIYDYLLK-EGKKDADILRGLERYFYQLFLFFAHIKTtGlMDAKEV---LGyapPkEi--AENYAKNAlR 299
WP_013553342 211 LFNKKPID--ETLERLLD-LGANEYEILRATQFFVHQIFLFHAYIRIhGvADSKAI---LGyklPkH--VEQQKAALSAR 282
YP_002344059 206 ILKKQDFK--SELEKILD--NFNEIALINSLYNSFYRLFKIALYAKInGkIDFKEL---LGytpPpQ--VGQNLSSQAfS 276
WP_014769101 213 LLEKKDIK--EEFERLIEgDGMEEIRMINAIEAHVVQLFLFHAYIKLhGsFDAKAI---LGyplPpH--IAAQRSQHSiK 285
WP_013327404 209 LLDKKDFR--DDLLNILE-HGEDEIRIISAITAYLTQLYMFNIYIRInGaPNALEI---LGypaPsF--IVEQKASAAiK 280
WP_085784375 212 VLTRQSKSIIERMPHNLDvQ--DSIALHRLMLRYFLNLFELRHSLND-H-TPLDKAlTTLS--QPvYsnQAKILKSVLPL 285
BBG65421     210 LFSKKSLK--DLLEQVQQ-LGEDEFAILRAVQYFAGQLFLFHSHIKLfGtADSSAV---LGyrlPkP--LEQQRAQLAAR 281
3ZH9_B       299 FSEEELRLIIEQLAVMDYEMKTGKK-D 324
WP_013459537 279 ISPEGYKRGINLLLDTELKMKSTGSpD 305
WP_011980123 283 VKSASLLKIFEHLLESEIEMKKAPA-T 308
NP_208039    300 LKEAGYKRVFEIFRLWHIQSMQGQK-E 325
WP_013553342 283 IKPATWIKIHDHLLSSELQLKKSRS-D 308
YP_002344059 277 LKIEQYKEIFTLLLKSEYELKTNPKlV 303
WP_014769101 286 IDVYTYKLLLTLLSEAEYRLKKTSNlD 312
WP_013327404 281 IKPQTYSKLHELLLNSELQMKSSNV-D 306
WP_085784375 286 WSVGGLKSVLGQLEILDRSLKSGlT-D 311
BBG65421     282 IPTDRFEKIFDALAEGELAVKTAGSsS 308
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