2WQ4


Conserved Protein Domain Family
Bc2l-C_N

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cd12211: Bc2l-C_N 
Click on image for an interactive view with Cn3D
N-Terminal Domain Of Bc2l-C Lectin
Lectin BC2L-C of Burkholderia cenocepacia is one of several lectins produced by this pathogen. BC2L-C has been shown to bind fucosylated human histo-blood group epitopes H-type 1, Lewis B, and Lewis Y. The C-terminal domain resembles BC2L-A, a calcium dependent mannose-binding protein. The N-terminal domain trimerizes and binds alpha-MeSeFuc in pockets between the monomeric units. The N-terminal domain has a similar structure to tumor necrosis factor (TNF).
Statistics
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PSSM-Id: 213404
Aligned: 8 rows
Threshold Bit Score: 212.097
Created: 6-Sep-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 40 residues -Click on image for an interactive view with Cn3D
Feature 1:trimer interface [polypeptide binding site]
Evidence:
  • Structure:2WQ4: Burkholderia cenocepacia BC2L-C lectin domain forms a trimer, contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ####                          #       # #  # ##       #               ##########
2WQ4_A         2 PLLSASIVSAPVVTsETYVDIPGLYLDVAKAGIRDGKLQVI-LNVPTPYATGNNFPGIYFAIATNQG-VVADGCFTYSSK 79  Burkholderia ce...
CAE16612       5 FASIDPRSNPLQTSsQNYVDIPGLKLDVSKYSNSPCLTALItLNIPTPYASGNNFPGGNFAIVTDQGeQLAYGGFTYSSK 84  Photorhabdus lu...
NP_931418      5 FASIDPRSNPLQTSsQNYVDIPGLKLDVSKYSNSPCLTALItLNIPTPYASGNNFPGGNFAIVTDQGeQLAYGGFTYSSK 84  Photorhabdus lu...
YP_002232818   3 LLSASIVSAPVVTS-ETYVDIPGLYLDVAKAGIRDGKLQVI-LNVPTPYATGNNFPGIYFAIATNQG-VVADGCFTYSSK 79  Burkholderia ce...
YP_373689      3 LLSASIVSAPVATS-ETYVDIPGLYIDIAKAEIRDGKLQVI-LNVPTPYATGNNFPGIYFAIATDKG-VVADGCFTYSSK 79  Burkholderia sp...
CCE46721       3 LLSASIVSAPVVTS-ETYVDIPGLYLDVAKAGIRDGKLQVI-LNVPTPYATGNNFPGIYFAIATNQG-VVADGCFTYSSK 79  Burkholderia ce...
YP_624831      3 LLSASIVSAPVATS-EAYVDIPGLYIDIAKAGIRDGKLQVI-LNVPTPYATGNNFPGIYFAIATNQG-VVADGCFTYSSK 79  Burkholderia ce...
YP_001777938   3 LLSASIVSAPVATS-EAYVDIPGLYIDIAKAGIRDGKLQVI-LNVPTPYATGNNFPGIYFAIATNQG-VVADGCFTYSAK 79  Burkholderia ce...
Feature 1          ## ## #######                          # # ### ## # 
2WQ4_A        80 VPESTGRXPFTLVATIDVGSGVTFVKGQWKSVRGSAXHIDSYASLSAIWGTAAP 133 Burkholderia cenocepacia J2315
CAE16612      85 IPENSGRMPFTLVARYSLASNVSTIKAQWSNIRGSTVHIDSYASISAVIQCNQL 138 Photorhabdus luminescens subsp. laumondii...
NP_931418     85 IPENSGRMPFTLVARYSLASNVSTIKAQWSNIRGSTVHIDSYASISAVIQCNQL 138 Photorhabdus luminescens subsp. laumondii...
YP_002232818  80 VPESTGRMPFTLVATIDVGSGVTFVKGQWKSVRGSAMHIDSYASLSAIWGTAAP 133 Burkholderia cenocepacia J2315
YP_373689     80 VPEATGRMPFTLVATINVGSGVTFVKGQWKSVRGSAMHIDSYASLSAIGDTAAQ 133 Burkholderia sp. 383
CCE46721      80 VPESTGRMPFTLVATIDAGSGVTFVKGQWKSVRGSAMHIDSYASLSAIGGTAAL 133 Burkholderia cenocepacia H111
YP_624831     80 VPESTGRMPFTLVATIDVGSGVTFVKGQWKSVRGSAMHIDSYASLSAIGETAAP 133 Burkholderia cenocepacia AU 1054
YP_001777938  80 VPESTGRMPFTLVATIDVGSGVTYVKGRWKSVRGSAMHIDSYASLSAIGETAAP 133 Burkholderia cenocepacia MC0-3

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