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Items: 5

1.

Reliable analysis of the catabolic gene landscape and transcriptome for pollutant degradation using a custom open source microarray with internal calibration

(Submitter supplied) Despite various efforts to develop tools to detect and compare the activity and catabolic potential and activity for pollutant degradation of microorganisms in environmental samples, an open-source, curated and reliable method is still required. Here we report on a customize normalization system that can be applied to any microarray design, allowing the assessment of reliability of signals and enabling cross-experiment comparisons. more...
Organism:
Cupriavidus pinatubonensis JMP134; Paraburkholderia xenovorans LB400; Rhizorhabdus wittichii RW1; unidentified microorganism; Pseudomonas putida F1
Type:
Expression profiling by array
Platform:
GPL13771
23 Samples
Download data: TXT
Series
Accession:
GSE30303
ID:
200030303

Analyze with GEO2R

2.

JMP134 3XSSC_50 degree C

Organism:
Cupriavidus pinatubonensis JMP134
Source name:
Pure culture
Platform:
GPL13771
Series:
GSE30303
Download data: TXT
Sample
Accession:
GSM751127
ID:
300751127

3.

JMP134 2XSSC_55 degree C

Organism:
Cupriavidus pinatubonensis JMP134
Source name:
Pure culture
Platform:
GPL13771
Series:
GSE30303
Download data: TXT
Sample
Accession:
GSM751126
ID:
300751126

4.

JMP134 1XSSC_55 degree C

Organism:
Cupriavidus pinatubonensis JMP134
Source name:
Pure culture
Platform:
GPL13771
Series:
GSE30303
Download data: TXT
Sample
Accession:
GSM751125
ID:
300751125

5.

JMP134 0.1XSSC_55 degree C

Organism:
Cupriavidus pinatubonensis JMP134
Source name:
Pure culture
Platform:
GPL13771
Series:
GSE30303
Download data: TXT
Sample
Accession:
GSM751124
ID:
300751124

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db=gds|term=txid264198[Organism:noexp]|query=4|qty=6|blobid=MCID_6662614cbb845b085ba2de32|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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