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Links from GEO DataSets

Items: 3

1.

Transcriptome of Helicobacter pylori in presence or absence of the cagPAI

(Submitter supplied) To investigate the impact of the cagPAI on transcript regulation of H. pylori, RNA-seq was performed on bacterial samples with presence or absence of the cagPAI.
Organism:
Helicobacter pylori
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19488
4 Samples
Download data: XLSX
Series
Accession:
GSE227450
ID:
200227450
2.

Cag pathogenicity island-specific responses of gastric epithelial cells to Helicobacter pylori infection.

(Submitter supplied) TC1: gastric epithelial (AGS) cells infected with wild type H. pylori (G27) and isogenic mutants in cagA and vacA for 0, 0.5, 3, 6, and 12 hours. Total RNA was used to make single stranded Cy5 labelled probe and compared to Cy3 labelled probe from uninfected AGS cells. Hybridizations of G27 (trial 4) and cagA- (trial 3) timecourses were done in parallel. A technical replicate of the G27 time course (trial 5) and hybridization of vacA- (trial 3) time course were done in parallel. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
4 related Platforms
54 Samples
Download data
Series
Accession:
GSE3556
ID:
200003556
3.

Interfering with interferons: cholesterol modification by Helicobacter pylori prevents IFN receptor assembly

(Submitter supplied) Interferons (IFNs) are thought to primarily protect against intracellular pathogens. Here we show that Helicobacter pylori, a chronic colonizer of gastric mucosal surfaces, effectively blocks both type I and type II IFN signalling via cholesterol-α-glucosyltransferase (CaGT). Thus, CaGT, causing depletion of cholesterol from host cells, prevents infected epithelial cells from executing crucial effector functions, including the production of human b-defensin 3 (hBD3). more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL10332
4 Samples
Download data: TXT
Series
Accession:
GSE76589
ID:
200076589
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