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htr1 sensory rhodopsin I transducer Htr1 [ Halobacterium salinarum ]

Gene ID: 39855562, updated on 30-Mar-2024

Summary

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Gene symbol
htr1
Gene description
sensory rhodopsin I transducer Htr1
Locus tag
HBSAL_RS08445
Gene type
protein coding
Organism
Halobacterium salinarum (strain: 91-R6, culture-collection: DSM:3754, type-material: type strain of Halobacterium salinarum)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
HBSAL_08625
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Genomic context

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NZ_CP038631.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene universal stress protein Neighboring gene sensory rhodopsin I Neighboring gene CBS domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP038631.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The methyl-accepting transducer protein HtrI is functionally associated with the photoreceptor sensory rhodopsin I in the archaeon Halobacterium salinarium. Ferrando-May E, et al. EMBO J, 1993 Aug. PMID 8344242, Free PMC Article
  2. A transducer for microbial sensory rhodopsin that adopts GTG as a start codon is identified in Haloarcula marismortui. Fu HY, et al. J Photochem Photobiol B, 2013 Apr 5. PMID 23474528
  3. Phototaxis of Halobacterium salinarium requires a signalling complex of sensory rhodopsin I and its methyl-accepting transducer HtrI. Krah M, et al. EMBO J, 1994 May 1. PMID 8187768, Free PMC Article
  4. A novel six-rhodopsin system in a single archaeon. Fu HY, et al. J Bacteriol, 2010 Nov. PMID 20802037, Free PMC Article
  5. Whole-genome comparison between the type strain of Halobacterium salinarum (DSM 3754(T) ) and the laboratory strains R1 and NRC-1. Pfeiffer F, et al. Microbiologyopen, 2020 Feb. PMID 31797576, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
sensory rhodopsin I transducer Htr1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP038631.1 Reference assembly

    Range
    1601076..1602686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010903210.1 sensory rhodopsin I transducer Htr1 [Halobacterium salinarum]

    See identical proteins and their annotated locations for WP_010903210.1

    UniProtKB/Swiss-Prot
    B0R632, P0DMI3, P33741, P33955, Q9HPF6
    UniProtKB/TrEMBL
    A0A4D6GXR4, A0A510N7L2, A0A841H930
    Conserved Domains (3) summary
    smart00304
    Location:157 → 202
    HAMP; HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
    smart00283
    Location:231 → 494
    MA; Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)
    cd06225
    Location:58 → 102
    HAMP; Histidine kinase, Adenylyl cyclase, Methyl-accepting protein, and Phosphatase (HAMP) domain
Nucleotide Protein
Heading Accession and Version