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BURCE16_RS00375 HU family DNA-binding protein [ Burkholderia cepacia ]

Gene ID: 56659845, updated on 3-Apr-2024

Summary

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Gene symbol
BURCE16_RS00375
Gene description
HU family DNA-binding protein
Locus tag
BURCE16_RS00375
Gene type
protein coding
Organism
Burkholderia cepacia (strain: BC16)
Lineage
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
Old locus tag
BURCE16_00345
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Genomic context

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Location:
chromosome: 1

1 - NZ_CP045235.1Genomic Context describing neighboring genes Neighboring gene lytic transglycosylase domain-containing protein Neighboring gene GTP-binding protein Neighboring gene bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC Neighboring gene cation:proton antiporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP045235.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure-based analysis of HU-DNA binding. Swinger KK, et al. J Mol Biol, 2007 Jan 26. PMID 17097674, Free PMC Article
  2. Functional evolution of bacterial histone-like HU proteins. Grove A. Curr Issues Mol Biol, 2011. PMID 20484776
  3. IHF and HU: flexible architects of bent DNA. Swinger KK, et al. Curr Opin Struct Biol, 2004 Feb. PMID 15102446
  4. Whole-genome assemblies of 56 burkholderia species. Daligault HE, et al. Genome Announc, 2014 Nov 20. PMID 25414490, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
HU family DNA-binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP045235.1 Reference assembly

    Range
    73296..73574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_006401505.1 MULTISPECIES: HU family DNA-binding protein [Burkholderiaceae]

    See identical proteins and their annotated locations for WP_006401505.1

    UniProtKB/TrEMBL
    A0A071MDN3, A0A081V8L5, A0A084DNH8, A0A087NMW1, A0A095GIL7, A0A095W5K1, A0A0B6RGV3, A0A0D0FTJ9, A0A0D5J2Q9, A0A0G3YVC9, A0A0H2XM23, A0A0H3KFG7, A0A102LSQ7, A0A103B4Z4, A0A103EI21, A0A103KSK7, A0A103L8T6, A0A103QXX1, A0A117VKS7, A0A119DI95, A0A119RRW6, A0A124P912, A0A132EXR7, A0A1B4BNB8, A0A1B4EYT7, A0A1B4MPX9, A0A1B4NNX2, A0A1D7ZD66, A0A1I0KRD9, A0A1K1S661, A0A1X1PC97, A0A228I0X2, A0A228J5H2, A0A228K4K8, A0A228QKA1, A0A228RM07, A0A2A4C9Z4, A0A2A4FD25, A0A2A9LMK4, A0A2J6MRI1, A0A2J9H6E4, A0A2U9SJ96, A0A364GN35, A0A365QQJ8, A0A3N7ZRS3, A0A3N7ZSQ2, A0A3N8ATE4, A0A3N8D9C1, A0A3N8H0C2, A0A3N8HJ07, A0A3N8LD53, A0A3P0MSL9, A0A3P0NDF7, A0A3P0SAZ3, A0A495YIV2, A0A4R4C0D0, A0A4R9MF87, A0A4S5CSC5, A0A4U1HQ35, A0A560V4S3, A0A6J5DY45, A0A7C9FAQ7, A0A806UX14, A0A807EHF1, A0A808W661, A0A892I748, A0A8E2SYX1, A0A9Q9SLD9, A0A9W3K0M4, A0AA41EA85, A0AA87JE69, A2VTV7, A2W6A2, A4J9Z4, B1FDP4, B1K1H6, B1T6A5, B1YQ53, B4E7A4, B9BCI9, B9BZC7, C5A837, F0GDL1, F2LH28, I2DIF4, Q0BJQ7, Q39L17, U2G1G9
    Conserved Domains (1) summary
    cd13831
    Location:2 → 87
    HU; histone-like DNA-binding protein HU
Nucleotide Protein
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