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BURCE16_RS14910 Rid family hydrolase [ Burkholderia cepacia ]

Gene ID: 56662752, updated on 3-Apr-2024

Summary

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Gene symbol
BURCE16_RS14910
Gene description
Rid family hydrolase
Locus tag
BURCE16_RS14910
Gene type
protein coding
Organism
Burkholderia cepacia (strain: BC16)
Lineage
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
Old locus tag
BURCE16_14700
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Genomic context

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Location:
chromosome: 1

1 - NZ_CP045235.1Genomic Context describing neighboring genes Neighboring gene NADPH-dependent 7-cyano-7-deazaguanine reductase QueF Neighboring gene VOC family protein Neighboring gene D-aminoacylase Neighboring gene MurR/RpiR family transcriptional regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP045235.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rid7C, a Member of the YjgF/YER057c/UK114 (Rid) Protein Family, Is a Novel Endoribonuclease That Regulates the Expression of a Specialist RNA Polymerase Involved in Differentiation in Nonomuraea gerenzanensis. Damiano F, et al. J Bacteriol, 2022 Feb 15. PMID 34694905, Free PMC Article
  2. Mycobacterium tuberculosis Rv2704 is a member of the YjgF/YER057c/UK114 family. Thakur KG, et al. Proteins, 2010 Feb 15. PMID 19899170, Free PMC Article
  3. A role for a highly conserved protein of unknown function in regulation of Bacillus subtilis purA by the purine repressor. Rappu P, et al. J Bacteriol, 1999 Jun. PMID 10368157, Free PMC Article
  4. Reduced transaminase B (IlvE) activity caused by the lack of yjgF is dependent on the status of threonine deaminase (IlvA) in Salmonella enterica serovar Typhimurium. Schmitz G, et al. J Bacteriol, 2004 Feb. PMID 14729707, Free PMC Article
  5. Ribonuclease activity of rat liver perchloric acid-soluble protein, a potent inhibitor of protein synthesis. Morishita R, et al. J Biol Chem, 1999 Jul 16. PMID 10400702

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Rid family hydrolase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP045235.1 Reference assembly

    Range
    3191125..3191511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_006751946.1 MULTISPECIES: Rid family hydrolase [Burkholderia]

    See identical proteins and their annotated locations for WP_006751946.1

    UniProtKB/TrEMBL
    A0A063BCR9, A0A071M901, A0A084DBH9, A0A087P1S8, A0A102EJW2, A0A102RT04, A0A103L736, A0A1B4F008, A0A1I0LCS4, A0A1K1SY02, A0A1Y1BFN9, A0A228QPG7, A0A2A4C2Q3, A0A2U9SKG8, A0A365QJB9, A0A3N8BN25, A0A3N8BXN2, A0A3N8EAH1, A0A3N8H724, A0A3N8M035, A0A3N8PPF7, A0A3P0SRZ6, A0A495YLH4, A0A4R4BUZ0, A0A4S5CX91, A0A6J5EL40, A0A6P2G1I2, A0A6P2GU95, A0A6P3AXB8, A0A7C9C214, A0A806UNF0, A0A9Q9US39, A0AA41EAZ8, B1FFF0, B1T7R9, B1YWG5, Q0BBX8, U2HDB9
    Conserved Domains (1) summary
    cl10015
    Location:18 → 124
    YjgF_YER057c_UK114_family; YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no ...
Nucleotide Protein
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