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FG342_RS02670 cell wall hydrolase P40 [ Lacticaseibacillus rhamnosus ]

Gene ID: 69830622, updated on 30-Mar-2024

Summary

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Gene symbol
FG342_RS02670
Gene description
cell wall hydrolase P40
Locus tag
FG342_RS02670
Gene type
protein coding
Organism
Lacticaseibacillus rhamnosus (strain: 1.0320)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lacticaseibacillus
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Genomic context

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NZ_CP040780.1Genomic Context describing neighboring genes Neighboring gene ammonium transporter Neighboring gene NAD(P)/FAD-dependent oxidoreductase Neighboring gene ABC transporter permease Neighboring gene ABC transporter ATP-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP040780.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and biochemical characterization of the cell wall hydrolase activity of the major secreted protein of Lactobacillus rhamnosus GG. Claes IJ, et al. PLoS One, 2012. PMID 22359601, Free PMC Article
  2. Functional analysis of the p40 and p75 proteins from Lactobacillus casei BL23. Bäuerl C, et al. J Mol Microbiol Biotechnol, 2010. PMID 21178363, Free PMC Article
  3. A Lactobacillus rhamnosus GG-derived soluble protein, p40, stimulates ligand release from intestinal epithelial cells to transactivate epidermal growth factor receptor. Yan F, et al. J Biol Chem, 2013 Oct 18. PMID 24043629, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
cell wall hydrolase P40

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP040780.1 Reference assembly

    Range
    523875..525125 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005687968.1 cell wall hydrolase P40 [Lacticaseibacillus rhamnosus]

    See identical proteins and their annotated locations for WP_005687968.1

    UniProtKB/TrEMBL
    A0A249DA52, A0A2A5L221, K8Q5N6
    Conserved Domains (2) summary
    COG3883
    Location:4 → 263
    CwlO1; Uncharacterized N-terminal domain of peptidoglycan hydrolase CwlO [Function unknown]
    pfam05257
    Location:303 → 390
    CHAP; CHAP domain
Nucleotide Protein
Heading Accession and Version