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Select item 83582281.

A Eukaryote-Wide Perspective on the Diversity and Evolution of the ARF GTPase Protein Family

Romana Vargová, Jeremy G Wideman, Romain Derelle, Vladimír Klimeš, Richard A Kahn, Joel B Dacks, Marek Eliáš

Genome Biol Evol. 2021 Aug; 13(8): evab157. Published online 2021 Jul 10. doi: 10.1093/gbe/evab157

PMCID:: PMC8358228

Abstract Article PDF–2.0M

Select item 81850702.

Author Correction: A molecular timescale for eukaryote evolution with implications for the origin of red algal-derived plastids

Jürgen F. H. Strassert, Iker Irisarri, Tom A. Williams, Fabien Burki

Nat Commun. 2021; 12: 3574. Published online 2021 Jun 7. doi: 10.1038/s41467-021-23847-w

Corrects:: Nat Commun. 2021; 12: 1879.

PMCID:: PMC8185070

Correction PDF–1.2M

Select item 79805913.

The iron-sulfur scaffold protein HCF101 unveils the complexity of organellar evolution in SAR, Haptista and Cryptista

Jan Pyrih, Vojtěch Žárský, Justin D. Fellows, Christopher Grosche, Dorota Wloga, Boris Striepen, Uwe G. Maier, Jan Tachezy

BMC Ecol Evol. 2021; 21: 46. Published online 2021 Mar 19. doi: 10.1186/s12862-021-01777-x

PMCID:: PMC7980591

Abstract Article PDF–3.1M

Select item 81365154.

Is the Dinoflagellate Amoebophrya Really Missing an mtDNA?

Ehsan Kayal, David R Smith

Mol Biol Evol. 2021 Jun; 38(6): 2493–2496. Published online 2021 Feb 10. doi: 10.1093/molbev/msab041

PMCID:: PMC8136515

Abstract Article PDF–313K

Select item 74496785.

Chlamydial contribution to anaerobic metabolism during eukaryotic evolution

Courtney W. Stairs, Jennah E. Dharamshi, Daniel Tamarit, Laura Eme, Steffen L. Jørgensen, Anja Spang, Thijs J. G. Ettema

Sci Adv. 2020 Aug; 6(35): eabb7258. Published online 2020 Aug 26. doi: 10.1126/sciadv.abb7258

PMCID:: PMC7449678

Abstract Article PDF–450K

Select item 68742166.

Recombinant RquA catalyzes the in vivo conversion of ubiquinone to rhodoquinone in Escherichia coli and Saccharomyces cerevisiae

Ann C. Bernert, Evan J. Jacobs, Samantha R. Reinl, Christina C.Y. Choi, Paloma M. Roberts Buceta, John C. Culver, Carly R. Goodspeed, Michelle C. Bradley, Catherine F. Clarke, Gilles J. Basset, Jennifer N. Shepherd

Biochim Biophys Acta Mol Cell Biol Lipids. Author manuscript; available in PMC 2019 Nov 22.

Published in final edited form as: Biochim Biophys Acta Mol Cell Biol Lipids. 2019 Sep; 1864(9): 1226–1234. Published online 2019 May 21. doi: 10.1016/j.bbalip.2019.05.007

PMCID:: PMC6874216

Abstract Article PDF–1.2M

Select item 60062107.

Fe–S cluster assembly in the supergroup Excavata

Priscila Peña-Diaz, Julius Lukeš

J Biol Inorg Chem. 2018; 23(4): 521–541. Published online 2018 Apr 5. doi: 10.1007/s00775-018-1556-6

Correction in:: J Biol Inorg Chem. 2018; 23(4): 543.

PMCID:: PMC6006210

Abstract Article PDF–2.7M

Select item 49004528.

Environmental Breviatea harbor mutualistic Arcobacter epibionts

Emmo Hamann, Harald Gruber-Vodicka, Manuel Kleiner, Halina E. Tegetmeyer, Dietmar Riedel, Sten Littmann, Jianwei Chen, Jana Milucka, Bernhard Viehweger, Kevin W. Becker, Xiaoli Dong, Courtney W. Stairs, Kai-Uwe Hinrichs, Matthew W. Brown, Andrew J. Roger, Marc Strous

Nature. Author manuscript; available in PMC 2016 Dec 9.

Published in final edited form as: Nature. 2016 Jun 9; 534(7606): 254–258. doi: 10.1038/nature18297

PMCID:: PMC4900452

Abstract Article PDF–3.2M

Select item 49891089.

Novel Hydrogenosomes in the Microaerophilic Jakobid Stygiella incarcerata

Michelle M. Leger, Laura Eme, Laura A. Hug, Andrew J. Roger

Mol Biol Evol. 2016 Sep; 33(9): 2318–2336. Published online 2016 Jun 8. doi: 10.1093/molbev/msw103

Correction in:: Mol Biol Evol. 2017 Apr; 34(4): 1027.

PMCID:: PMC4989108

Abstract Article PDF–1.0M

Select item 457156510.

Diversity and origins of anaerobic metabolism in mitochondria and related organelles

Courtney W. Stairs, Michelle M. Leger, Andrew J. Roger

Philos Trans R Soc Lond B Biol Sci. 2015 Sep 26; 370(1678): 20140326. doi: 10.1098/rstb.2014.0326

PMCID:: PMC4571565

Abstract Article PDF–1.1M

Select item 434317911.

Bacterial proteins pinpoint a single eukaryotic root

Romain Derelle, Guifré Torruella, Vladimír Klimeš, Henner Brinkmann, Eunsoo Kim, Čestmír Vlček, B. Franz Lang, Marek Eliáš

Proc Natl Acad Sci U S A. 2015 Feb 17; 112(7): E693–E699. Published online 2015 Feb 2. doi: 10.1073/pnas.1420657112

PMCID:: PMC4343179

Abstract Article PDF–1.1M

Select item 437940912.

Lateral Gene Transfer and Gene Duplication Played a Key Role in the Evolution of Mastigamoeba balamuthi Hydrogenosomes

Eva Nývltová, Courtney W. Stairs, Ivan Hrdý, Jakub Rídl, Jan Mach, Jan Pačes, Andrew J. Roger, Jan Tachezy

Mol Biol Evol. 2015 Apr; 32(4): 1039–1055. Published online 2015 Jan 7. doi: 10.1093/molbev/msu408

PMCID:: PMC4379409

Abstract Article PDF–1.4M

Select item 422434013.

Complex Patterns of Gene Fission in the Eukaryotic Folate Biosynthesis Pathway

Finlay Maguire, Fiona L. Henriquez, Guy Leonard, Joel B. Dacks, Matthew W. Brown, Thomas A. Richards

Genome Biol Evol. 2014 Oct; 6(10): 2709–2720. Published online 2014 Sep 23. doi: 10.1093/gbe/evu213

PMCID:: PMC4224340

Abstract Article PDF–1.0M

Select item 376831714.

Phylogenomics demonstrates that breviate flagellates are related to opisthokonts and apusomonads

Matthew W. Brown, Susan C. Sharpe, Jeffrey D. Silberman, Aaron A. Heiss, B. Franz Lang, Alastair G. B. Simpson, Andrew J. Roger

Proc Biol Sci. 2013 Oct 22; 280(1769): 20131755. doi: 10.1098/rspb.2013.1755

PMCID:: PMC3768317

Abstract Article PDF–1.1M

Select item 1070327215.

Genomics of Preaxostyla Flagellates Illuminates the Path Towards the Loss of Mitochondria

Lukáš V. F. Novák, Sebastian C. Treitli, Jan Pyrih, Paweł Hałakuc, Shweta V. Pipaliya, Vojtěch Vacek, Ondřej Brzoň, Petr Soukal, Laura Eme, Joel B. Dacks, Anna Karnkowska, Marek Eliáš, Vladimír Hampl

PLoS Genet. 2023 Dec; 19(12): e1011050. Published online 2023 Dec 7. doi: 10.1371/journal.pgen.1011050

PMCID:: PMC10703272

Abstract Article PDF–1.9M

Select item 1007728616.

Group-specific functional patterns of mitochondrion-related organelles shed light on their multiple transitions from mitochondria in ciliated protists

Zhicheng Chen, Jia Li, Dayana E. Salas-Leiva, Miaoying Chen, Shilong Chen, Senru Li, Yanyan Wu, Zhenzhen Yi

Mar Life Sci Technol. 2022 Nov; 4(4): 609–623. Published online 2022 Nov 21. doi: 10.1007/s42995-022-00147-w

PMCID:: PMC10077286

Abstract Article PDF–4.1M

Select item 999803617.

A Mitosome With Distinct Metabolism in the Uncultured Protist Parasite Paramikrocytos canceri (Rhizaria, Ascetosporea)

Ioana Onuț-Brännström, Courtney W Stairs, Karla Iveth Aguilera Campos, Markus Hiltunen Thorén, Thijs J G Ettema, Patrick J Keeling, David Bass, Fabien Burki

Genome Biol Evol. 2023 Mar; 15(3): evad022. Published online 2023 Feb 15. doi: 10.1093/gbe/evad022

PMCID:: PMC9998036

Abstract Article PDF–4.8M

Select item 925576518.

Old genes in new places: A taxon-rich analysis of interdomain lateral gene transfer events

Auden Cote-L’Heureux, Xyrus X. Maurer-Alcalá, Laura A. Katz

PLoS Genet. 2022 Jun; 18(6): e1010239. Published online 2022 Jun 22. doi: 10.1371/journal.pgen.1010239

PMCID:: PMC9255765

Abstract Article PDF–2.3M

Select item 916177219.

Evidence for an Independent Hydrogenosome-to-Mitosome Transition in the CL3 Lineage of Fornicates

Romana Vargová, Pavla Hanousková, Jana Salamonová, David Žihala, Jeffrey D. Silberman, Marek Eliáš, Ivan Čepička

Front Microbiol. 2022; 13: 866459. Published online 2022 May 19. doi: 10.3389/fmicb.2022.866459

PMCID:: PMC9161772

Abstract Article PDF–5.6M

Select item 901035620.

Ciliary transition zone evolution and the root of the eukaryote tree: implications for opisthokont origin and classification of kingdoms Protozoa, Plantae, and Fungi

Thomas Cavalier-Smith

Protoplasma. 2022; 259(3): 487–593. Published online 2021 Dec 23. doi: 10.1007/s00709-021-01665-7

PMCID:: PMC9010356

Abstract Article PDF–26M

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