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Select item 95700291.

Archaea Microbiome Dysregulated Genes and Pathways as Molecular Targets for Lung Adenocarcinoma and Squamous Cell Carcinoma

Matthew Uzelac, Yuxiang Li, Jaideep Chakladar, Wei Tse Li, Weg M. Ongkeko

Int J Mol Sci. 2022 Oct; 23(19): 11566. Published online 2022 Sep 30. doi: 10.3390/ijms231911566

PMCID:: PMC9570029

Abstract Article PDF–3.8M

Select item 62648612.

Rumen microbiome in dairy calves fed copper and grape-pomace dietary supplementations: Composition and predicted functional profile

Filippo Biscarini, Fiorentina Palazzo, Federica Castellani, Giulia Masetti, Lisa Grotta, Angelo Cichelli, Giuseppe Martino

PLoS One. 2018; 13(11): e0205670. Published online 2018 Nov 29. doi: 10.1371/journal.pone.0205670

PMCID:: PMC6264861

Abstract Article PDF–1.1M

Select item 61658723.

The Planktonic Core Microbiome and Core Functions in the Cattle Rumen by Next Generation Sequencing

Roland Wirth, Gyula Kádár, Balázs Kakuk, Gergely Maróti, Zoltán Bagi, Árpád Szilágyi, Gábor Rákhely, József Horváth, Kornél L. Kovács

Front Microbiol. 2018; 9: 2285. Published online 2018 Sep 24. doi: 10.3389/fmicb.2018.02285

PMCID:: PMC6165872

Abstract Article PDF–5.9M

Select item 40362684.

A Rhomboid Protease Gene Deletion Affects a Novel Oligosaccharide N-Linked to the S-layer Glycoprotein of Haloferax volcanii

Juliana Parente, Adriana Casabuono, María Celeste Ferrari, Roberto Alejandro Paggi, Rosana Esther De Castro, Alicia Susana Couto, María Inés Giménez

J Biol Chem. 2014 Apr 18; 289(16): 11304–11317. Published online 2014 Mar 4. doi: 10.1074/jbc.M113.546531

PMCID:: PMC4036268

Abstract Article PDF–1.8M

Select item 36259585.

Identification and prioritization of novel uncharacterized peptidases for biochemical characterization

Neil D. Rawlings

Database (Oxford) 2013; 2013: bat022. Published online 2013 Apr 12. doi: 10.1093/database/bat022

PMCID:: PMC3625958

Abstract Article PDF–329K

Select item 35919866.

Cyclic di-GMP: the First 25 Years of a Universal Bacterial Second Messenger

Ute Römling, Michael Y. Galperin, Mark Gomelsky

Microbiol Mol Biol Rev. 2013 Mar; 77(1): 1–52. doi: 10.1128/MMBR.00043-12

PMCID:: PMC3591986

Abstract Article PDF–8.3M

Select item 36284487.

Gene Capture Coupled to High-Throughput Sequencing as a Strategy for Targeted Metagenome Exploration

Jérémie Denonfoux, Nicolas Parisot, Eric Dugat-Bony, Corinne Biderre-Petit, Delphine Boucher, Diego P. Morgavi, Denis Le Paslier, Eric Peyretaillade, Pierre Peyret

DNA Res. 2013 Apr; 20(2): 185–196. Published online 2013 Jan 30. doi: 10.1093/dnares/dst001

PMCID:: PMC3628448

Abstract Article PDF–394K

Select item 34486638.

An Intertwined Evolutionary History of Methanogenic Archaea and Sulfate Reduction

Dwi Susanti, Biswarup Mukhopadhyay

PLoS One. 2012; 7(9): e45313. Published online 2012 Sep 21. doi: 10.1371/journal.pone.0045313

PMCID:: PMC3448663

Abstract Article PDF–833K

Select item 31534859.

The RelA/SpoT Homolog (RSH) Superfamily: Distribution and Functional Evolution of ppGpp Synthetases and Hydrolases across the Tree of Life

Gemma C. Atkinson, Tanel Tenson, Vasili Hauryliuk

PLoS One. 2011; 6(8): e23479. Published online 2011 Aug 9. doi: 10.1371/journal.pone.0023479

PMCID:: PMC3153485

Abstract Article PDF–2.3M

Select item 308291710.

Structures and activities of archaeal members of the LigD 3′-phosphoesterase DNA repair enzyme superfamily

Paul Smith, Pravin A. Nair, Ushati Das, Hui Zhu, Stewart Shuman

Nucleic Acids Res. 2011 Apr; 39(8): 3310–3320. Published online 2011 Jan 5. doi: 10.1093/nar/gkq1163

PMCID:: PMC3082917

Abstract Article PDF–10M

Select item 300438911.

A Novel Pathway for the Biosynthesis of Heme in Archaea: Genome-Based Bioinformatic Predictions and Experimental Evidence

Sonja Storbeck, Sarah Rolfes, Evelyne Raux-Deery, Martin J. Warren, Dieter Jahn, Gunhild Layer

Archaea. 2010; 2010: 175050. Published online 2010 Dec 13. doi: 10.1155/2010/175050

PMCID:: PMC3004389

Abstract Article PDF–834K

Select item 295285212.

Comparative genomics of cyclic-di-GMP signalling in bacteria: post-translational regulation and catalytic activity

Aswin S.N. Seshasayee, Gillian M. Fraser, Nicholas M. Luscombe

Nucleic Acids Res. 2010 Oct; 38(18): 5970–5981. Published online 2010 May 18. doi: 10.1093/nar/gkq382

PMCID:: PMC2952852

Abstract Article PDF–3.0M

Select item 287262413.

Identification and Genomic Analysis of Transcription Factors in Archaeal Genomes Exemplifies Their Functional Architecture and Evolutionary Origin

Ernesto Pérez-Rueda, Sarath Chandra Janga

Mol Biol Evol. 2010 Jun; 27(6): 1449–1459. Published online 2010 Feb 1. doi: 10.1093/molbev/msq033

PMCID:: PMC2872624

Abstract Article PDF–725K

Select item 793812214.

Information theoretic perspective on genome clustering

Alaguraj Veluchamy, Preeti Mehta, K.V. Srividhya, Hirendra Vikram, M.K. Govind, Ramneek Gupta, Abdul Aziz Bin Dukhyil, Raed Abdullah Alharbi, Saleh Abdullah Aloyuni, Mohamed M. Hassan, S. Krishnaswamy

Saudi J Biol Sci. 2021 Mar; 28(3): 1867–1889. Published online 2020 Dec 31. doi: 10.1016/j.sjbs.2020.12.039