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Items: 1 to 20 of 39

1.
Phylogenetic investigation of Gammaproteobacteria proteins involved in exogenous long-chain fatty acid acquisition and assimilation
Saksham Saksena, Kwame Forbes, Nipun Rajan, David Giles
Biochem Biophys Rep. 2023 Sep; 35: 101504. Published online 2023 Jul 4. doi: 10.1016/j.bbrep.2023.101504
PMCID:
PMC10439403
AbstractArticlePDF–5.8M
2.
Recovery of phosphorus from wastewater: A review based on current phosphorous removal technologies
Yulin Zheng, Yongshan Wan, Yue Zhang, Jinsheng Huang, Yicheng Yang, Daniel C. W. Tsang, Hailong Wang, Hao Chen, Bin Gao
Crit Rev Environ Sci Technol. Author manuscript; available in PMC 2023 Sep 30.
Published in final edited form as: Crit Rev Environ Sci Technol. 2022 Sep 30; 53(11): 1148–1172. doi: 10.1080/10643389.2022.2128194
PMCID:
PMC10116781
AbstractArticlePDF–1.9M
3.
Structural Basis for a Cork-Up Mechanism of the Intra-Molecular Mesaconyl-CoA Transferase
Pascal Pfister, Jan Zarzycki, Tobias J. Erb
Biochemistry. 2023 Jan 3; 62(1): 75–84. Published online 2022 Dec 19. doi: 10.1021/acs.biochem.2c00532
PMCID:
PMC9813914
AbstractArticlePDF–12M
4.
Microbial Phylogenetic Context Using Phylogenetic Outlines
Caner Bagci, David Bryant, Banu Cetinkaya, Daniel H Huson
Genome Biol Evol. 2021 Sep; 13(9): evab213. Published online 2021 Sep 14. doi: 10.1093/gbe/evab213
PMCID:
PMC8462278
AbstractArticlePDF–602K
5.
NADH-driven poly-3-hydroxybutyrate accumulation in Escherichia coli: Data from enzymatic assays and oxygen-limited continuous cultures
Karel Olavarria, Caspar Quakkelaar, Joachim van Renselaar, Dennis Langerak, Mark C.M. van Loosdrecht, S.A. Wahl
Data Brief. 2020 Dec; 33: 106588. Published online 2020 Nov 28. doi: 10.1016/j.dib.2020.106588
PMCID:
PMC7726675
AbstractArticlePDF–3.0M
6.
Trehalose as an osmolyte in Candidatus Accumulibacter phosphatis
Danny R. de Graaff, Mark C. M. van Loosdrecht, Mario Pronk
Appl Microbiol Biotechnol. 2021; 105(1): 379–388. Published online 2020 Oct 19. doi: 10.1007/s00253-020-10947-8
PMCID:
PMC7778627
AbstractArticlePDF–3.5M
7.
Principal Component Analysis applied directly to Sequence Matrix
Tomokazu Konishi, Shiori Matsukuma, Hayami Fuji, Daiki Nakamura, Nozomi Satou, Kunihiro Okano
Sci Rep. 2019; 9: 19297. Published online 2019 Dec 17. doi: 10.1038/s41598-019-55253-0
PMCID:
PMC6917774
AbstractArticlePDF–4.0M
8.
nifPred: Proteome-Wide Identification and Categorization of Nitrogen-Fixation Proteins of Diaztrophs Based on Composition-Transition-Distribution Features Using Support Vector Machine
Prabina K. Meher, Tanmaya K. Sahu, Jyotilipsa Mohanty, Shachi Gahoi, Supriya Purru, Monendra Grover, Atmakuri R. Rao
Front Microbiol. 2018; 9: 1100. Published online 2018 May 29. doi: 10.3389/fmicb.2018.01100
PMCID:
PMC5986947
AbstractArticlePDF–3.1M
9.
Effect of Salt on the Metabolism of ‘Candidatus Accumulibacter’ Clade I and II
Zhongwei Wang, Aislinn Dunne, Mark C. M. van Loosdrecht, Pascal E. Saikaly
Front Microbiol. 2018; 9: 479. Published online 2018 Mar 16. doi: 10.3389/fmicb.2018.00479
PMCID:
PMC5865004
AbstractArticlePDF–1.8M
10.
Effects of electron acceptors on sulphate reduction activity in activated sludge processes
Francisco Rubio-Rincón, Carlos Lopez-Vazquez, Laurens Welles, Tessa van den Brand, Ben Abbas, Mark van Loosdrecht, Damir Brdjanovic
Appl Microbiol Biotechnol. 2017; 101(15): 6229–6240. Published online 2017 May 25. doi: 10.1007/s00253-017-8340-3
PMCID:
PMC5522498
AbstractArticlePDF–3.9M
11.
The novel regulatory ncRNA, NfiS, optimizes nitrogen fixation via base pairing with the nitrogenase gene nifK mRNA in Pseudomonas stutzeri A1501
Yuhua Zhan, Yongliang Yan, Zhiping Deng, Ming Chen, Wei Lu, Chao Lu, Liguo Shang, Zhimin Yang, Wei Zhang, Wei Wang, Yun Li, Qi Ke, Jiasi Lu, Yuquan Xu, Liwen Zhang, Zhihong Xie, Qi Cheng, Claudine Elmerich, Min Lin
Proc Natl Acad Sci U S A. 2016 Jul 26; 113(30): E4348–E4356. Published online 2016 Jul 12. doi: 10.1073/pnas.1604514113
PMCID:
PMC4968741
AbstractArticlePDF–1.7M
12.
“Candidatus Propionivibrio aalborgensis”: A Novel Glycogen Accumulating Organism Abundant in Full-Scale Enhanced Biological Phosphorus Removal Plants
Mads Albertsen, Simon J. McIlroy, Mikkel Stokholm-Bjerregaard, Søren M. Karst, Per H. Nielsen
Front Microbiol. 2016; 7: 1033. Published online 2016 Jul 4. doi: 10.3389/fmicb.2016.01033
PMCID:
PMC4930944
AbstractArticlePDF–3.2M
13.
The evolutionary history and diagnostic utility of the CRISPR-Cas system within Salmonella enterica ssp. enterica
James B. Pettengill, Ruth E. Timme, Rodolphe Barrangou, Magaly Toro, Marc W. Allard, Errol Strain, Steven M. Musser, Eric W. Brown
PeerJ. 2014; 2: e340. Published online 2014 Apr 17. doi: 10.7717/peerj.340
PMCID:
PMC3994646
AbstractArticlePDF–2.7M
14.
Holding a grudge: Persisting anti-phage CRISPR immunity in multiple human gut microbiomes
Eran Mick, Adi Stern, Rotem Sorek
RNA Biol. 2013 May 1; 10(5): 900–906. Published online 2013 Feb 25. doi: 10.4161/rna.23929
PMCID:
PMC3737347
AbstractArticlePDF–1.3M
15.
Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms
Arshan Nasir, Aisha Naeem, Muhammad Jawad Khan, Horacio D. Lopez-Nicora, Gustavo Caetano-Anollés
Genes (Basel) 2011 Dec; 2(4): 869–911. Published online 2011 Nov 8. doi: 10.3390/genes2040869
PMCID:
PMC3927607
AbstractArticlePDF–2.0M
16.
Transport genes and chemotaxis in Laribacter hongkongensis: a genome-wide analysis
Susanna KP Lau, Rachel YY Fan, Gilman KM Wong, Jade LL Teng, Kong-Hung Sze, Herman Tse, Kwok-Yung Yuen, Patrick CY Woo
Cell Biosci. 2011; 1: 28. Published online 2011 Aug 17. doi: 10.1186/2045-3701-1-28
PMCID:
PMC3180692
AbstractArticlePDF–1.9M
17.
Diversity and strength of internal outward-oriented promoters in group IIC-attC introns
Grégory Léon, Cecilia Quiroga, Daniela Centrón, Paul H. Roy
Nucleic Acids Res. 2010 Dec; 38(22): 8196–8207. Published online 2010 Aug 16. doi: 10.1093/nar/gkq709
PMCID:
PMC3001079
AbstractArticlePDF–3.2M
18.
Diversity of Haloquadratum and other haloarchaea in three, geographically distant, Australian saltern crystallizer ponds
Dickson Oh, Kate Porter, Brendan Russ, David Burns, Mike Dyall-Smith
Extremophiles. 2010; 14(2): 161–169. Published online 2009 Dec 20. doi: 10.1007/s00792-009-0295-6
PMCID:
PMC2832888
AbstractArticlePDF–372K
19.
Making All Parts of the 16S rRNA of Escherichia coli Accessible In Situ to Single DNA Oligonucleotides
L. Şafak Yilmaz, Hatice E. Ökten, Daniel R. Noguera
Appl Environ Microbiol. 2006 Jan; 72(1): 733–744. doi: 10.1128/AEM.72.1.733-744.2006
PMCID:
PMC1352245
AbstractArticlePDF–737K
20.
Native microalgal-bacterial consortia from the Ecuadorian Amazon region: an alternative to domestic wastewater treatment
Amanda M. López-Patiño, Ana Cárdenas-Orrego, Andrés F. Torres, Danny Navarrete, Pascale Champagne, Valeria Ochoa-Herrera
Front Bioeng Biotechnol. 2024; 12: 1338547. Published online 2024 Feb 26. doi: 10.3389/fbioe.2024.1338547
PMCID:
PMC10925762
AbstractArticlePDF–1.3M

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