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Links from Protein

Items: 12

1.

ABC transporter C-terminal domain

This domain is found at the C-terminus of ABC transporters. It has a coiled coil structure with an atypical 3(10)-helix in the alpha-hairpin region. It is involved in DNA_binding [1]. [1]. 22995754. The C-terminal domain of the Uup protein is a DNA-binding coiled. coil motif.. Carlier L, Haase AS, Burgos Zepeda MY, Dassa E, Lequin O;. J Struct Biol. 2012;180:577-584. (from Pfam)

GO Terms:
Molecular Function:
DNA binding (GO:0003677)
Date:
2024-04-03

Family Accession:
NF027650.4
Method:
HMM

2.

AAA family ATPase

Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system. (from Pfam)

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Molecular Function:
ATP hydrolysis activity (GO:0016887)
Date:
2023-12-12

Family Accession:
NF024700.4
Method:
HMM

3.

ABC transporter

This domain is an extension of some members of Pfam:PF00005 and other ABC-transporter families. (from Pfam)

Date:
2023-12-12

Family Accession:
NF024256.4
Method:
HMM

4.

ATP-binding cassette domain-containing protein

ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain Pfam:PF00664. These four domains may belong to a single polypeptide as in Swiss:P13569, or belong in different polypeptide chains. [1]. 1864505. Homology between proteins controlling Streptomyces fradiae. tylosin resistance and ATP-binding transport.. Rosteck PR Jr, Reynolds PA, Hershberger CL;. Gene 1991;102:27-32.. [2]. 1977073. Structure and function of haemolysin B,P-glycoprotein and other. members of a novel family of membrane translocators.. Blight MA, Holland IB;. Mol Microbiol 1990;4:873-880.. [3]. 2229036. Binding protein-dependent transport systems.. Higgins CF, Hyde SC, Mimmack MM, Gileadi U, Gill DR, Gallagher. MP;. J Bioenerg Biomembr 1990;22:571-592.. [4]. 9872322. Crystal structure of the ATP-binding subunit of an ABC. transporter.. Hung LW, Wang IX, Nikaido K, Liu PQ, Ames GF, Kim SH;. Nature 1998;396:703-707. (from Pfam)

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Date:
2024-04-03

Family Accession:
NF012235.4
Method:
HMM

5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
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7.
new record, indexing in progress
Family Accession:
8.
new record, indexing in progress
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9.
new record, indexing in progress
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10.
new record, indexing in progress
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11.
new record, indexing in progress
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12.

ABC-F family ATP-binding cassette domain-containing protein

ABC-F family ATP-binding cassette domain-containing protein similar to Caulobacter vibrioides holdfast attachment protein C (also called ATP-binding protein Uup) and Bacillus subtilis ATP-binding proteins YdiF and YfmR

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Date:
2022-07-12

Family Accession:
11422934
Method:
Sparcle

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