Natrinema ejinorense sp. nov., isolated from a saline lake in Inner Mongolia, China

Int J Syst Evol Microbiol. 2006 Nov;56(Pt 11):2683-2687. doi: 10.1099/ijs.0.64421-0.

Abstract

A Gram-negative, non-motile, neutrophilic, pleomorphic and extremely halophilic archaeon, strain EJ-57T, was isolated from saline Lake Ejinor in Inner Mongolia, China. Strain EJ-57T was able to grow at 25-50 degrees C, required at least 1.8 M NaCl for growth (optimum at 3.4 M NaCl) and grew over a pH range from 6.0 to 8.5 (optimum at pH 7.0). Hypotonic treatment with less than 1.5 M NaCl caused cell lysis. Analysis of the almost complete 16S rRNA gene sequence indicated that the isolate represented a member of the genus Natrinema in the family Halobacteriaceae. Strain EJ-57T was most closely related to Natrinema versiforme JCM 10478T (96.2% sequence similarity), Natrinema pallidum NCIMB 777T (95.9% sequence similarity), Natrinema altunense JCM 12890T (95.8% sequence similarity) and Natrinema pellirubrum NCIMB 786T (95.5 % sequence similarity). However, DNA-DNA hybridization experiments showed that strain EJ-57T was not related to these species, with levels of DNA-DNA relatedness equal to or below 39%. The major polar lipids of the isolate were C20C20 and C20C25 derivatives of phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester and the disulfated glycolipid S2-DGA-1. The G+C content of the genomic DNA was 64.7 mol%. Comparative analysis of phenotypic characteristics between strain EJ-57T and recognized Natrinema species supported the conclusion that EJ-57T represents a novel species within this genus, for which the name Natrinema ejinorense sp. nov. is proposed. The type strain is EJ-57T (=CECT 7144T=JCM 13890T=CGMCC 1.6202T).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition
  • Carbohydrate Metabolism
  • China
  • DNA, Archaeal / chemistry
  • DNA, Archaeal / isolation & purification
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / isolation & purification
  • Gelatin / metabolism
  • Genes, rRNA
  • Halobacteriaceae / classification*
  • Halobacteriaceae / cytology
  • Halobacteriaceae / isolation & purification*
  • Halobacteriaceae / physiology
  • Hydrogen Sulfide / metabolism
  • Hydrogen-Ion Concentration
  • Lipids / analysis
  • Molecular Sequence Data
  • Movement
  • Nucleic Acid Hybridization
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Saline Solution, Hypertonic
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Sodium Chloride / metabolism
  • Starch / metabolism
  • Temperature
  • Water Microbiology*

Substances

  • DNA, Archaeal
  • DNA, Ribosomal
  • Lipids
  • RNA, Ribosomal, 16S
  • Saline Solution, Hypertonic
  • Sodium Chloride
  • Gelatin
  • Starch
  • Hydrogen Sulfide

Associated data

  • GENBANK/AM231733