Natronobacterium texcoconense sp. nov., a haloalkaliphilic archaeon isolated from soil of a former lake

Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):4163-4166. doi: 10.1099/ijs.0.053629-0. Epub 2013 Jun 7.

Abstract

A novel haloalkaliphilic archaeon, strain B23(T) was isolated from the former lake Texcoco in Mexico. The strain was Gram-stain-negative, the cells coccoid to ovoid rods, red pigmented and aerobic. Strain B23(T) grew in 1.7-4.3 M NaCl, at pH 6.5-9.5 and at 25-45 °C with optimal growth at 2.6-3.4 M NaCl, pH 7.5-8.5 and 37 °C. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain B23(T) was most closely related to Natronobacterium gregoryi SP2(T) with 97.3 % sequence similarity. The polar lipids of strain B23(T) were phosphatidylglycerol and several unidentified phospholipids. The G+C content of the DNA of the strain was 62.5 mol%. Levels of DNA-DNA relatedness between strain B23(T) and Natronobacterium gregoryi DSM 3393(T) was 32.3 %. The name Natronobacterium texcoconense sp. nov. is proposed. The type strain is B23(T) ( = CECT 8068(T) = JCM 17655(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition
  • DNA, Archaeal / genetics
  • Hydrogen-Ion Concentration
  • Lakes
  • Mexico
  • Molecular Sequence Data
  • Natronobacterium / classification*
  • Natronobacterium / genetics
  • Natronobacterium / isolation & purification
  • Nucleic Acid Hybridization
  • Phospholipids / chemistry
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Salinity
  • Soil Microbiology*

Substances

  • DNA, Archaeal
  • Phospholipids
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/JN571120