Paenibacillus alba nov., isolated from peat soil

Curr Microbiol. 2015 Jun;70(6):865-70. doi: 10.1007/s00284-015-0795-9. Epub 2015 Mar 21.

Abstract

A white-colored bacterial strain designated J20-6(T) was isolated from peat soil collected in Russia. Based on the 16S rRNA gene sequence similarities, the strain J20-6(T) belonged to the genus Paenibacillus, and the closest relatives were Paenibacillus frigoriresistens YIM 016(T) (98.2 %), Paenibacillus alginolyticus DSM 5050T(T) (97.9 %), Paenibacillus chondroitinus DSM 5051(T) (97.4 %), Paenibacillus pocheonensis Gsoil 1138(T) (96.9 %), and Paenibacillus pectinilyticus RCB-08(T) (96.6 %). Cells are gram-positive, motile, facultative aerobic, endospore forming, and rod shaped. The cell wall contains MK-7 as the predominant menaquinone and meso-diaminopimelic acid as the diagnostic diamino acid. The major fatty acid is anteiso-C15:0, and the major polar lipids are diphosphatidylglycerol and phosphatidyl-ethanolamine. The DNA G+C content of the strain J20-6(T) was 49.9 mol %. The phenotypic, chemotaxonomic, and phylogenetic data clearly suggest that the strain J20-6(T) belongs to the novel member of the genus Paenibacillus, for which the name Paenibacillus alba sp. nov., is proposed. The type strain is J20-6(T) (=KEMC 7302-005(T) = JCM 18165(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aerobiosis
  • Bacterial Typing Techniques
  • Base Composition
  • Cell Wall / chemistry
  • Cluster Analysis
  • Cytosol / chemistry
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Diaminopimelic Acid / analysis
  • Fatty Acids / analysis
  • Locomotion
  • Molecular Sequence Data
  • Paenibacillus / classification*
  • Paenibacillus / genetics
  • Paenibacillus / isolation & purification*
  • Paenibacillus / physiology
  • Phospholipids / analysis
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Russia
  • Sequence Analysis, DNA
  • Soil
  • Soil Microbiology*
  • Vitamin K 2 / analysis

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Phospholipids
  • RNA, Ribosomal, 16S
  • Soil
  • Vitamin K 2
  • Diaminopimelic Acid

Associated data

  • GENBANK/JQ966212