Cloning, sequencing, and expression of the gene encoding cyclic 2, 3-diphosphoglycerate synthetase, the key enzyme of cyclic 2, 3-diphosphoglycerate metabolism in Methanothermus fervidus

J Bacteriol. 1998 Nov;180(22):5997-6004. doi: 10.1128/JB.180.22.5997-6004.1998.

Abstract

Cyclic 2,3-diphosphoglycerate synthetase (cDPGS) catalyzes the synthesis of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond in 2,3-diphosphoglycerate. cDPG is known to be accumulated to high intracellular concentrations (>300 mM) as a putative thermoadapter in some hyperthermophilic methanogens. For the first time, we have purified active cDPGS from a methanogen, the hyperthermophilic archaeon Methanothermus fervidus, sequenced the coding gene, and expressed it in Escherichia coli. cDPGS purification resulted in enzyme preparations containing two isoforms differing in their electrophoretic mobility under denaturing conditions. Since both polypeptides showed the same N-terminal amino acid sequence and Southern analyses indicate the presence of only one gene coding for cDPGS in M. fervidus, the two polypeptides originate from the same gene but differ by a not yet identified modification. The native cDPGS represents a dimer with an apparent molecular mass of 112 kDa and catalyzes the reversible formation of the intramolecular phosphoanhydride bond at the expense of ATP. The enzyme shows a clear preference for the synthetic reaction: the substrate affinity and the Vmax of the synthetic reaction are a factor of 8 to 10 higher than the corresponding values for the reverse reaction. Comparison with the kinetic properties of the electrophoretically homogeneous, apparently unmodified recombinant enzyme from E. coli revealed a twofold-higher Vmax of the enzyme from M. fervidus in the synthesizing direction.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 2,3-Diphosphoglycerate / metabolism*
  • Amino Acid Sequence
  • Archaeal Proteins*
  • Base Sequence
  • Catalysis
  • Cloning, Molecular
  • DNA, Archaeal
  • Escherichia coli
  • Gene Expression
  • Genes, Archaeal*
  • Methanobacteriales / enzymology*
  • Methanobacteriales / genetics
  • Molecular Sequence Data
  • Phosphorus-Oxygen Lyases / chemistry
  • Phosphorus-Oxygen Lyases / genetics*
  • Phosphorus-Oxygen Lyases / isolation & purification
  • Protein Conformation

Substances

  • Archaeal Proteins
  • DNA, Archaeal
  • 2,3-Diphosphoglycerate
  • cyclic-2,3-diphosphoglycerate
  • Phosphorus-Oxygen Lyases
  • cdpgs protein, Methanothermus fervidus

Associated data

  • GENBANK/Y09856