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SRX081398: Indexed sequencing of MTB and E.coli strains
1 ILLUMINA (Illumina HiSeq 2000) run: 2.5M spots, 517.3M bases, 331.7Mb downloads

UUID: e7ee7059-8ad2-4fcf-b83e-3a3645cdff5e
Design: Illumina sequencing of Escherichia coli PBC20 via random selection
Submitted by: Broad Institute (BI)
Study: Bacterial/Fungal Persistence Gene Identification Multi-Isolate Project
PRJNA38649 • SRP001124 • All experiments • All runs
show Abstracthide Abstract
Persistence Comparative
Sample: Generic sample from Escherichia coli PBC20
SAMN00631794 • SRS213702 • All experiments • All runs
Organism: Escherichia coli PBC20
Library:
Name: Pond-67136
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward barcode
Group tagBasecalls
CGTTACCA
110  reverse

Experiment attributes: (show all 10 attributes...) (hide...)
analysis_type: AssemblyWithReference
gssr_id: 100232.0
library_type: WholeGenomeShotgun
lsid: broadinstitute.org:bsp.prod.sample:1X2JG
material_type: DNA:DNA Somatic
primary_disease: Persistence Comparative: E.coli
project: G13317
root_sample_id: SM-1RKXH
sample_id: SM-1X2JG
work_request: 25407
Pipeline: show...hide...
NameStepProgramVersionNotes
base caller2011-07-06 20:10:10.0GAPipelineRTA1.12.4.1Sequencer Application 1.4.5
Runs: 1 run, 2.5M spots, 517.3M bases, 331.7Mb
Run# of Spots# of BasesSizePublished
SRR3260842,463,179517.3M331.7Mb2011-08-02

ID:
92043

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