Burkholderia pseudomallei 68(1992) - SRA

SRX286348: Burkholderia pseudomallei 68(1992)
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 3.8M spots, 309M bases, 165.7Mb downloads

Design: The DNA samples were prepared for multiplexed (single-read, 82 cycles) sequencing using Illumina GAIIx genome analyzer (Illumina Inc., San Diego, CA). For each isolate, genomic library preps were generated using Nextera DNA Sample Prep Kit. Post library quality control and quantification was done using BioAnalyzer 2100 high-sensitivity chips and KAPA SYBR FAST Universal 2X qPCR Master Mix. Post processing of reads was performed by the RTA/SCS v1.9.35.0 and CASAVA 1.8.0. Reads were trimmed back to the Q30 level using CLCBio's quality_trim program, CutAdapt v0.95 was used to excise adapter and transposon contamination.

Submitted by: THE GEORGE WASHINGTON UNIVERSITY

Study: Investigating the diversity of Burkholderia pseudomallei isolates

PRJNA194126 • SRP023117 • All experiments • All runs

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Illumina sequencing of barcoded sample library Burkholderia pseudomallei for the study “Investigating the diversity of Burkholderia pseudomallei isolates."

Sample: Generic sample from Burkholderia pseudomallei

SAMN01991030 • SRS429182 • All experiments • All runs

Organism: Burkholderia pseudomallei 68(1992)

Library:

Name: Burkholderia

Instrument: Illumina Genome Analyzer IIx

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

1 forward

Runs: 1 run, 3.8M spots, 309M bases, 165.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR867126	3,768,219	309M	165.7Mb	2013-08-12

ID:: 404238

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