Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX360706: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-231239' containing sample 'Lachnospiraceae bacterium ORNL_2UT_Ab5152_178'
3 ILLUMINA (Illumina HiSeq 2000) runs: 20.5M spots, 4.2G bases, 2.5Gb downloads

UUID: e5589752-2e1f-420c-82cc-91fe4493153d

Design: Illumina sequencing of Lachnospiraceae bacterium ORNL_2UT_Ab5152_178 via random selection

Submitted by: Broad Institute (BI)

Study: HMP reference genome

PRJNA217607 • SRP030554 • All experiments • All runs

Sample: Generic sample from Lachnospiraceae bacterium ORNL_2UT_Ab5152_178

SAMN00690835 • SRS254775 • All experiments • All runs

Organism: Lachnospiraceae bacterium ORNL_2UT_Ab5152_178

Library:

Name: Pond-231239

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 299947.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:3ZR5V

material_type: DNA:DNA Somatic

product_order: PDO-358

product_part_number: P-WG-0004

project: G31889

research_project: RP-129

root_sample_id: SM-2TBSE

sample_id: SM-3ZR5V

work_request: 35855

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-04-02 11:57:43.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 3 runs, 20.5M spots, 4.2G bases, 2.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR1003686	6,746,382	1.4G	860Mb	2013-09-27
SRR1003687	6,860,429	1.4G	858.1Mb	2013-09-27
SRR1003688	6,938,862	1.4G	867.3Mb	2013-09-27

ID:: 509911

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