Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX462993: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319273' containing sample 'ABC020028455'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.4M spots, 682.9M bases, 350.4Mb downloads

UUID: 0d801900-0dc1-46b9-9dc9-da9129cc5354

Design: Illumina sequencing of Streptococcus pyogenes ABC020028455 via random selection

Submitted by: Broad Institute (BI)

Study: Group A Streptococcus

PRJNA233129 • SRP036301 • All experiments • All runs

Sample: Generic sample from Streptococcus pyogenes ABC020028455

SAMN02567478 • SRS551772 • All experiments • All runs

Organism: Streptococcus pyogenes ABC020028455

Library:

Name: Pond-319273

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471608.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CMVX

material_type: DNA:DNA Somatic

product_order: PDO-2718

product_part_number: P-WG-0004

project: G56789

research_project: RP-560

root_sample_id: SM-4ME62

sample_id: SM-5CMVX

work_request: 39852

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.4M spots, 682.9M bases, 350.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1159035	3,380,655	682.9M	350.4Mb	2014-02-04

ID:: 643161

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