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SRX3576174: Mapped reads for uncultivated Synechococcales bacterium UBA8138 genome recovered from SRX474032
1 ILLUMINA (Illumina HiSeq 2000) run: 91,708 spots, 16.1M bases, 7.8Mb downloads

Design: Reads from SRX474032 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8138 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Synechococcales bacterium UBA8138 genome recovered from SRX474032
SAMN08019255 • SRS2846055 • All experiments • All runs
Library:
Name: UBA8138_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 91,708 spots, 16.1M bases, 7.8Mb
Run# of Spots# of BasesSizePublished
SRR648623391,70816.1M7.8Mb2018-02-23

ID:
4961676

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