Whole genome Illumina NextSeq sequence of Escherichia coli serovar O1... - SRA

SRX3506577: Whole genome Illumina NextSeq sequence of Escherichia coli serovar O156
1 ILLUMINA (NextSeq 500) run: 51.4M spots, 7.5G bases, 2.8Gb downloads

External Id: EXT00201382

Design: NextSeq deep shotgun sequencing of cultured isolate.

Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)

Study: GenomeTrakr Project: US Food and Drug Administration

PRJNA230969 • SRP058582 • All experiments • All runs

show Abstracthide Abstract

Whole genome sequencing of cultured E. coli as part of the US Food and Drug Administration surveillance project for the rapid detection of foodborne contamination events.

Sample: Pathogen: environmental/food/other sample from Escherichia sp.

SAMN05464539 • SRS2784130 • All experiments • All runs

Organism: Escherichia sp. MOD1-EC5451

Library:

Name: Nextera XT library SEQ000041190

Instrument: NextSeq 500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward251 reverse