Whole genome Illumina MiSeq sequence of Escherichia coli serovar O40 - SRA

SRX3943406: Whole genome Illumina MiSeq sequence of Escherichia coli serovar O40
1 ILLUMINA (Illumina MiSeq) run: 895,840 spots, 417.1M bases, 246.5Mb downloads

External Id: EXT00306227

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)

Study: GenomeTrakr Project: Penn State University | Department of Food Science | Dudley Lab

PRJNA357722 • SRP101500 • All experiments • All runs

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Whole genome sequencing of cultured E. coli as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.

Sample:

SAMN08902747 • SRS3173954 • All experiments • All runs

Organism: Escherichia coli O40

Library:

Name: Nextera XT library SEQ000072327

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward251 reverse